| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1219 |
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| Symbol | |
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| ID | 3522197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1252900 |
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| End bp | 1253442 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637283683 |
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| Product | putative type IV pilus biogenesis protein |
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| Protein accession | YP_267962 |
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| Protein GI | 71281725 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTGACTA TCGTTATAGC AGCCATTATG GTAACAATTG CGGTTCCTAA CATGAATGAT
TTCATCGTAA AAATGCGTGT TGATAATGAA GTAAGTCAAC TTAACCGTTT AGTACTATCT
GCTCGCAACG GCGCAATATC ATTTGAGCAG CCAGCAATTA TTTGCCCATT AGTTAATGGG
GCATGTACTG CCAACTGGCA AAATGAGCTA ACCGCTTTCA TCGATCAAGA TAATAATGGT
GTTTATAATA ATGATGGCAA TGATGCAAAT CTTATAGCTA ACGACAAACT TATAAAAATA
AAAGCGGCCT CGACTACAGG TGATAGCATT ACTTATGCTG GTCAAATTAG TATTAGGTTT
GCGCCAACTG GGGCCTTGAG TCCAGCTGTT GCTGGCTCTC TTATTTATTG CCCACAAAGT
GATACTAGCC TTGCTCGCGC CATTGTTTTA TCTCTCTCTG GACGTTCGTA TTTAACGAGT
GATGCAGATA ATGACGGTAA AGATGAATTC AGAAATGGTG GAAATGTTAG TGATAGCTGC
TAA
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| Protein sequence | MVTIVIAAIM VTIAVPNMND FIVKMRVDNE VSQLNRLVLS ARNGAISFEQ PAIICPLVNG
ACTANWQNEL TAFIDQDNNG VYNNDGNDAN LIANDKLIKI KAASTTGDSI TYAGQISIRF
APTGALSPAV AGSLIYCPQS DTSLARAIVL SLSGRSYLTS DADNDGKDEF RNGGNVSDSC
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