| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1214 |
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| Symbol | |
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| ID | 3522467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1246661 |
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| End bp | 1247629 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283678 |
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| Product | hypothetical protein |
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| Protein accession | YP_267957 |
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| Protein GI | 71281995 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACCG AAAAAGGTCT GACCTTAGTT GAGCTGATGA TCAGTTTGTC TATTGGTTTA
GTCTTGTTTG CTGGGGTGTT AAGTGTCTTT GTTGGGATGC GGAGCACAAC GGCAGAAACA
TCAACCTACG GTGAATTACA AGAGAACGGA CGTTTTGCTA TAAGTGTATT AACAGACGAC
TTATTAAGGC AAGATTTCTG GGGTGATTAT GCTGGGCGTT TTAGTACAAG TAACCTTATA
AGTATACCTG CCGCGGGTTC TGTTGGTAAT GATTGTATAG GGGGAGGGGT TAATAATGCT
ACTTTCCCTC TTGCGGTAGG TCACTTTAGA ACAATATGGG GGCAAACACT AACAGCGGTG
GCACCAAATC CTTTGGGGTG TTTTGTTACT CCTGTAAACA CTAGAACTAG GCCTAACTCT
GACGTTATTC AGCTTAAGCG AGTGCTAGGT ACTCCCAATT TAGCTCCCGC GGCTGCCACA
TTTTACTTGC GCACTAATCA TACCACTGGA GGTATATTTC GAGGTAATGC TCTACCTGTA
ATAAATAACA CTCGTACCTG GGAGTATCAG CACCATGTGT ATTATGTACG AGAGGACATA
GTAGGCAATA ATTTTGTGCC TGTATTGATG CAAGGGCGTC TAGCAAATGG GAATATGGTT
TTTAATCCTA TTGTTGATGG CATTGAAGTT ATTCGTTTTA TGTATGGTAT TGATACAAAT
GGAGATGGTG TGGTCAACTC TTATATCTCT GCATCAGGAG GTAATATGAC TGATGCTTTG
TGGGATAATG CCGGTGGCTC AAGAATTTTA GCTGTTAAAG TATATGTTTT GGCGCGTAGT
ATTGCACCAG ATATGAAGTA TACCAATACC AACTCTTATC AATTAGGTGA CTTGGCTATA
GCGCCAGTAA ACGACAATTT TCGACGCCTA CTGTTTAGTT CAACAATAAC TTTATATAAC
GCGAGGTAA
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| Protein sequence | MNTEKGLTLV ELMISLSIGL VLFAGVLSVF VGMRSTTAET STYGELQENG RFAISVLTDD
LLRQDFWGDY AGRFSTSNLI SIPAAGSVGN DCIGGGVNNA TFPLAVGHFR TIWGQTLTAV
APNPLGCFVT PVNTRTRPNS DVIQLKRVLG TPNLAPAAAT FYLRTNHTTG GIFRGNALPV
INNTRTWEYQ HHVYYVREDI VGNNFVPVLM QGRLANGNMV FNPIVDGIEV IRFMYGIDTN
GDGVVNSYIS ASGGNMTDAL WDNAGGSRIL AVKVYVLARS IAPDMKYTNT NSYQLGDLAI
APVNDNFRRL LFSSTITLYN AR
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