Gene CPS_1150 details

Gene Information

• Locus tag: CPS_1150
• ID: 3520277
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1171914
• End bp: 1172528
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637283614
• Product: amino acid transporter LysE
• Protein accession: YP_267893
• Protein GI: 71279816
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTAG AGTTGTGGTT ATCGTTAGTT GTTATCTGTG TGTTAGGAGC ATTATCACCC 
GGTCCTTCAT TGGCATTAGT TGTGCGTAAT ACTATGTTGG GTGGCCATAA ACCGGGTTTA 
GCTACCGCCA TCAGTCATGG CTTTGGTGTT GGCTTGTATG CGGCTATTGC GGTAACCGGC 
ATTGGCCTTG TGATTGTCCA GTCACCCATA GTTTTTCAAA TTATTCAGTA TACAGGTGCC 
GCCTTTTTAC TTTATTTGGC CTTCAACGCG CTAAAAAGCA ATGGCAGTAA TATTGACCTT 
GATGTTGTAA AAGGGCAAAA CGATAAACGT ATAAATGGCT GGCGCGACGG TTTTTTATTG 
GCCTTTTTAA ACCCTAAGTT GGCGATATTC TTTTTAGCCT TATTCAGTCA GTTTGTTGAT 
GTTAATGCCA GCTTAACCCA TAAATTAATT ATGATTTTTA CCGTTGGTGG GCTCGATACA 
CTATGGTACT GCCTTGTGGT CTTTGGCTTA ACAAGAGGGC CCGTATTGGA AAAATTGAAA 
GCGAATAGTC ATATTATTGA TAAAATTACT GGCATAGTTT TACTATTACT TGCAGTACGT 
GTAGTCATTA ATTAG 

 

Protein sequence

MSLELWLSLV VICVLGALSP GPSLALVVRN TMLGGHKPGL ATAISHGFGV GLYAAIAVTG 
IGLVIVQSPI VFQIIQYTGA AFLLYLAFNA LKSNGSNIDL DVVKGQNDKR INGWRDGFLL 
AFLNPKLAIF FLALFSQFVD VNASLTHKLI MIFTVGGLDT LWYCLVVFGL TRGPVLEKLK 
ANSHIIDKIT GIVLLLLAVR VVIN