| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1101 |
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| Symbol | metH |
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| ID | 3522779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1119355 |
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| End bp | 1123047 |
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| Gene Length | 3693 bp |
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| Protein Length | 1230 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637283565 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_267845 |
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| Protein GI | 71282306 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.875071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT CATCATCATT TGCCTTATTT GAGCAACAGT TAGCAAAAAA CATTTTAATT
TTAGATGGTG CAATGGGCAC CATGATCCAA GCATATAAAT TTGAAGAGCA AGACTTTAGA
GCGGAACGCT TTGCTGATTG GCATACCGAT GTAAAAGGCA ATAACGATAT GTTAGTGCTT
ACTCAACCTG AAATCATTAA AGCGATTCAT CTTGAGTATC TTGAAGCCGG CGCTGATATT
CTTGAAACGA ATACGTTTAA CGCAACAACG ATTGCCATGG CCGATTACGA CATGCAAGAG
TATAGCGCTG AGATTAACCG TGTTGCTGCT CAAATAGCGC GAGAAGCGGC TGATGAGTAC
ACTAAAAAGA ACCCAGATCG TCCTCGTTTT GTTGCGGGTG TTTTAGGGCC AACAAACCGA
ACTTGTTCGA TTTCTCCTGA TGTCAACGAT CCTGCATATC GTAACGTTAC CTTTGATGAG
CTAAAAGATG CTTACATTGA ATCCACGTTA GCTTTGATTG AAGGCGGTAG TGACATTATT
TTAATCGAAA CTATTTTCGA TACCTTAAAT GCTAAAGCGG CAGTATTTGC AGTAGAAACT
GTATTTGACC AATTAGGTGA GCGTTTACCT GTAATGATTT CAGGTACTAT TACTGATGCC
TCGGGTCGTA CTCTATCAGG ACAAACCACA GAAGCTTTTT ACAATTCATT ACGTCATGCA
AAGCCTGTTT CCTTTGGTCT TAACTGTGCC TTAGGTCCCG TTGAATTACG CCAGTATGTT
GCTGAATTAA GCCGTATTTG TGATACGGCT GTTTCTGCCC ATCCTAATGC GGGTTTACCA
AATGCCTTCG GTGAGTATGA TTTCACCGTT GAAGACATGA ACACTCATGT AGAAGAGTGG
GCTTCATCAG GCTTTTTAAA TATCATTGGT GGCTGTTGTG GTACCACGCC TGAGCATATC
AGAGGCATGG CTGACTCAGT TGCAAAAATA AAACCGCGTA AAGTTGAAAA ACGTGAAATT
GCCTGTCGCT TATCTGGTTT AGAAGCATTA ACCATTAACA AAGATAGCTT GTTTGTAAAC
GTGGGCGAAC GTACCAATGT TACCGGCTCT GCCATGTTTA AGCGCTTAAT TGTTGAAGAA
GATTACGATA AAGCTATCTC TGTAGCTCTA CAACAAGTAG AAAATGGCGC GCAGATTATT
GATATCAACA TGGATGAAGG CATGTTGGAC TCAAAAACCG CCATGGTGCG TTTTTTGAAC
CTGATTGCTG GCGAACCAGA TATTGCTAAA GTGCCGATCA TGATTGACTC CTCTAAGTGG
GATATCATTG AAGCGGGCCT GAAATGTATT CAAGGTAAAG GCATTGTTAA CTCTATCAGC
TTAAAAGAGG GCGAAGAAAA CTTCCGTCAC CAAGCTGAAT TGCTTCGTCG TTACGGCGCG
GCTGTTATTG TTATGGCATT TGATGAAGAA GGACAAGCTG ATACGCGTAA GCGTAAATAT
GAAATTTGTC ATCGTGCTTA TCATATGTTG GTTGATGAAA TTGGTTACCC GCCAGAAGAT
ATTATTTTTG ACCCGAATAT TTTTGCTGTC GCCACAGGTA TTGAAGAGCA CAATAACTAC
GCGGTCGATT TTATCGAAGC AGTTGATGAC ATTAAGAAAA ATCTACCTTA TGCGATGATT
TCAGGTGGTG TATCTAACGT TTCTTTCTCA TTTAGAGGAA ACAACCCAGT GCGTGAAGCC
ATTCACGCAG TCTTTTTATA CTATGCCATT AAAAATGGTA TGGACATGGG GATTGTTAAC
GCTGGCCAAT TAGCTATTTA TTCAGACTTA CCAGCAAATC TAAAACAAGC GGTAGAAGAC
GTTATTCAAA ATAAGGATGA TGGTGCGACT GAACGCTTAC TTGATATTGC GCAAGAGTTT
CATGGTAAAG CTGGCGGACA AGCCTCAAAG ACTGATTTAA CTTGGCGAGA ATTACCGATT
AACGCACGTT TATCTCATGC GTTAGTTAAA GGTATTAATG AATTTATTAT TGAGGATACC
GAAGAAGCTC GTTTAGCGTC AGAGAAACCA TTAGATGTAA TTGAAGGGCC ATTGATGGAT
GGCATGAATA CCGTCGGTGA TTTATTTGGT GCGGGTGAAA TGTTCTTACC GCAAGTGGTA
AAATCAGCCC GTGTAATGAA ACAAGCGGTT GCTTATTTAA ACCCTTACAT CGAAGAGGGA
AAAACTGAAA TAAGCACCAA CGGTAAAGTA TTGCTCGCGA CGGTAAAAGG CGATGTACAC
GATATCGGGA AAAACATTGT TGGCGTAGTG CTGCAATGTA ATAACTACGA AATTATAGAT
CTTGGCGTGA TGGTTTCATG CGATGATATT TTACGTGTTG CTAAAGAAGA AAACGTCGAT
ATCATCGGTT TATCGGGCTT GATCACACCG TCGCTTGATG AAATGGTTTA TGTTGCTAAA
GAAATGAAAC GTACAGGCTT GAAACTGCCT CTATTAATTG GCGGTGCAAC CACGTCAAAA
GCCCATACAG CAGTAAAAAT TGAGCCGCAA TATGATGAAC CCGTAGTTTA TGTATCAAAC
GCTTCACGTG CGGTATCAGT AGTAAGTAAT TTATTATCAA GTGAGCATAA AGCAAAGTTC
TTTGCCAGTA CCCAAGAAGA ATATGAACGC GTACGTGTTC GTCATTATAA AAAAGGTCCG
CGCTCAAGTT TAATAAGCCT TGAAGCTGCT CGTGCTAATG CTACTAAAAT TAATTTTGAA
GATTATACGC CTAAAAAACC TAACAAACTG GGTGTAACTG TCCTTGATAA TATCGATTTG
AATGAAGTTA GAAAATATAT TGATTGGACG CCATTTTTCA TGACATGGCA AATGTCTGGT
AAGTATCCGC TTATTTTAAA ACATGAAGTG ATTGGTGTTG AAGCAACAAG CTTATTTAAT
GATGCTAACG CCATGCTTGA TGATGTTATT AATAATAAAA AAATATGTGC TAGAGCAGTA
TTTGGTTTGT TTCCTGCAAA CAGTAATCAA GATGATATAC AGCTATACAC AGATGAAAGT
CGCAGCGATA AATTAATGAG ACTTCACCAA CTACGTCAAC AAAGTAAAAA ACCAGCAGGG
CAGTTTAACC GTTGTTTAGC GGATTATATC GCACCAGAAG ACTCAGGCAT TGAAGATTAT
GTTGGTGCTT TTGCTGTGTC AGCAGGTTTT GGTGTTGAAG ATTTAGTCAA AGTTTTTGAT
GCAGATCACG ATGCCTATAA TTCAATATTA CTTAAAGCGG TAGCGGATAG ATTAGCGGAA
GCGAGTGCTG AATATTTACA TGAGAAAGTG CGTAAAGAAT ATTGGGGTTT TGCCCCTGAT
GAAGATTTAA ATAATGACGC GTTAATTCGC GAAAGTTATC AAGGTATTCG ACCTGCACCA
GGATATCCTG CTTGTCCTGA GCATACTGAG AAAGGTTTAT TGTGGGAGTT ACTCAATGTT
AAAGAAAACA TTGATATGGA CCTCACCTCA AGTTATGCGA TGTGGCCAGG TGCTGCAGTG
AGTGGTTGGT ACTTCTCGCA CCCAGAGTCT AAATACTTCG CGGTAGCAAA ATTAGCTAAA
GATCAGGTGC TAGATTATGC AGTTCGTAAA GGATTTACCT TAGAGCAAGC AGAACGTTGG
TTATCTGCAA ACTTAGACTA TGAACCAGAG TAA
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| Protein sequence | MKKSSSFALF EQQLAKNILI LDGAMGTMIQ AYKFEEQDFR AERFADWHTD VKGNNDMLVL
TQPEIIKAIH LEYLEAGADI LETNTFNATT IAMADYDMQE YSAEINRVAA QIAREAADEY
TKKNPDRPRF VAGVLGPTNR TCSISPDVND PAYRNVTFDE LKDAYIESTL ALIEGGSDII
LIETIFDTLN AKAAVFAVET VFDQLGERLP VMISGTITDA SGRTLSGQTT EAFYNSLRHA
KPVSFGLNCA LGPVELRQYV AELSRICDTA VSAHPNAGLP NAFGEYDFTV EDMNTHVEEW
ASSGFLNIIG GCCGTTPEHI RGMADSVAKI KPRKVEKREI ACRLSGLEAL TINKDSLFVN
VGERTNVTGS AMFKRLIVEE DYDKAISVAL QQVENGAQII DINMDEGMLD SKTAMVRFLN
LIAGEPDIAK VPIMIDSSKW DIIEAGLKCI QGKGIVNSIS LKEGEENFRH QAELLRRYGA
AVIVMAFDEE GQADTRKRKY EICHRAYHML VDEIGYPPED IIFDPNIFAV ATGIEEHNNY
AVDFIEAVDD IKKNLPYAMI SGGVSNVSFS FRGNNPVREA IHAVFLYYAI KNGMDMGIVN
AGQLAIYSDL PANLKQAVED VIQNKDDGAT ERLLDIAQEF HGKAGGQASK TDLTWRELPI
NARLSHALVK GINEFIIEDT EEARLASEKP LDVIEGPLMD GMNTVGDLFG AGEMFLPQVV
KSARVMKQAV AYLNPYIEEG KTEISTNGKV LLATVKGDVH DIGKNIVGVV LQCNNYEIID
LGVMVSCDDI LRVAKEENVD IIGLSGLITP SLDEMVYVAK EMKRTGLKLP LLIGGATTSK
AHTAVKIEPQ YDEPVVYVSN ASRAVSVVSN LLSSEHKAKF FASTQEEYER VRVRHYKKGP
RSSLISLEAA RANATKINFE DYTPKKPNKL GVTVLDNIDL NEVRKYIDWT PFFMTWQMSG
KYPLILKHEV IGVEATSLFN DANAMLDDVI NNKKICARAV FGLFPANSNQ DDIQLYTDES
RSDKLMRLHQ LRQQSKKPAG QFNRCLADYI APEDSGIEDY VGAFAVSAGF GVEDLVKVFD
ADHDAYNSIL LKAVADRLAE ASAEYLHEKV RKEYWGFAPD EDLNNDALIR ESYQGIRPAP
GYPACPEHTE KGLLWELLNV KENIDMDLTS SYAMWPGAAV SGWYFSHPES KYFAVAKLAK
DQVLDYAVRK GFTLEQAERW LSANLDYEPE
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