Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1061 |
Symbol | |
ID | 3521524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1085515 |
End bp | 1087689 |
Gene Length | 2175 bp |
Protein Length | 724 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637283525 |
Product | hypothetical protein |
Protein accession | YP_267805 |
Protein GI | 71281055 |
COG category | [R] General function prediction only |
COG ID | [COG1444] Predicted P-loop ATPase fused to an acetyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.640422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTCGTTT TATCGGGTTG TGAGTCTTGG GCAATGTCTT TATTACGCTC TATTGATGTG ATTCACGCGG CTTTAAGCAC AGAGACTAAA CAAAATTTTC AAACTTTTTC TTCGCAAGTT CAATGTCTTG TTTATGGTGA TAGCGCTATA TTTCCTGCAA ATGTACAGAG AAAACGCTAC CGGGATAAGT TAGGAAGTGA AAGTGATTTT ATTATTTTTG TCGATAGTGA GTTTACCATT GATGCATTTG CCGGCTTGTC GGGCACGCTA AAAGCTGGCG GAATATTATT TCTAGTTATA CCATCGAGAG ATGAGAAACT TGAACAAAGC CTGTTTTTTA AACGCTTTTA TTCACTATTA TCAAAGATGC CTAGTCATAC CATCATAACG GAGTCGCAAG CTTCGGTTTT ACCTCTTCAT TTTGATGTAG ATAATCCGGT AAAGCTGTCG GCAACTTCGA CTTACCCACA TGGCTGTATT ACCCAAGAGC AGTACAGTGC GGTTATCGCC ATCAAAAAAG TACTCTCAGG TCAAAGAAAA AGACCGCTAG TGTTAACGGC TGATCGTGGC CGAGGAAAGT CATCAGCATT GGCTATTGCC TGTGCTCAAC TGATGAAAGA ACACGAACAG GATGAGTTTG ATATTGTTAT TACTGCTCCT GATGTTCAAG CGCTGTCAGT TTTCTATCGG CAATTAAAGC AAAGCTTAAA TTGCGTCGAG CAGCAAGGTA ATACGATTAC CTTTGGCAAG GTTAAGTTAA CGTTTATGGC TGTTGACCAA TTAATAAGGT CACCGATAAA ACTTAATCTT CTTTTGGTCG ATGAAGCTGC GGCAATTCCT GTTTATCTAC TTGAACAATT ACTTAGAAGT TATCATCGGA TGGTTTTTTC TAGTACTGTT CATGGTTATG AAGGAGCTGG GCGAGGTTTT ACTTTAAAGT TTAAAAAAGT ACTTGATAGG TTATGCCCAC AATGGGTGAA TTTACATATT AATCAGCCGA TCCGTTGGCG GGAAAATGAT CCGCTTGAAC AATTGGTCTT TGACGCTTGT TTGTTAAATG CAGAATTACC TAAGTTGAAA ACAACATTAG CACCTCAGCC GCCTACCTAT GGCAAAGGTA GTTCTGTCGA GAAAGCCGAA GTCCTAAATA AATCAAATGA ACCTGTATTC AAAGTTATAT CTGCAAAAGA GCTGGTTGCT GATGAAGCAC TATTAAAGCA AGTTTTTGCT ATTTTGGTAA CAGCACACTA CCAAACTAAG CCGAGTGATT TACAGCTACT ACTAGATAAC CCTCAAGTAC AATTAACTTG CCTTTACTCT TCCAAAAATA ATGATGCAGA AATGCTAGCT GTTGCTTTAT TGATGAATGA AGGGAAGGGG AATAACGTGA GTGATGCAGA TATTCGAGCA ATAAAACATT CTGAACGTCG TTTACGTAAT CATTTTTTGC CGCAATCATT ATTCAGCCAT TGCGGTTTTG AACAAGCCTT TAATTATAAA TATTTACGTA TTATGCGCAT TGCTGTTCAC CCACAAATTC AGCAGCAAGG TATTGGTGCT CAATTTATTC ACTACATAGA ATTATTAGCA AAAGAGCAAG GTGTTGATTT TATTGGCGCT AGTTTTGGGG TTAATCCTGA GCTGCTTTCT TTCTGGCTTA ACGCTGGATT TTCTACTGCT AGAATTGGTT TCACCAAGGA CAAGGCTAGT GGAGAGCATT CTGCTTTATT AATTAAAGGA CTTGTTGTAA AAAGCAAGCA AGAGCAGCAG AGTTTTAAGC GTAACTTTTA TCAAAGTTTC GATTATTTAC TGTTAGAAGA ATATAGAGCA CTTACGACGG AGCTTGTATT TTTGTTATTG AGACAAAACT CTAAAGGAGA TGTAAGCGCT TTGTCTGAGC GAGATATTGC TAATGTTCAG GCATTTTCAC GTGGTGAACG CTTATATAGT AGTTGTTGTT ATAGTTTATA TTTATGGCTT AAGCAGGATC TGTTGAGTGA AACTAAGTGC CACTCAACAG AAGTTTTACA GCAGTCTTTA GTGCTTGTTG CAAGATTGAT TCAAAAGCAT GATAGTGACT CTGTTTGCCA ACAATTTGGC TTAACAGGGA AGAAAATGCT GAACAATCAT ATTAAAAACT ATGTACATTT AAGACTAAAT ACTGCAATTA ACTGA
|
Protein sequence | MVVLSGCESW AMSLLRSIDV IHAALSTETK QNFQTFSSQV QCLVYGDSAI FPANVQRKRY RDKLGSESDF IIFVDSEFTI DAFAGLSGTL KAGGILFLVI PSRDEKLEQS LFFKRFYSLL SKMPSHTIIT ESQASVLPLH FDVDNPVKLS ATSTYPHGCI TQEQYSAVIA IKKVLSGQRK RPLVLTADRG RGKSSALAIA CAQLMKEHEQ DEFDIVITAP DVQALSVFYR QLKQSLNCVE QQGNTITFGK VKLTFMAVDQ LIRSPIKLNL LLVDEAAAIP VYLLEQLLRS YHRMVFSSTV HGYEGAGRGF TLKFKKVLDR LCPQWVNLHI NQPIRWREND PLEQLVFDAC LLNAELPKLK TTLAPQPPTY GKGSSVEKAE VLNKSNEPVF KVISAKELVA DEALLKQVFA ILVTAHYQTK PSDLQLLLDN PQVQLTCLYS SKNNDAEMLA VALLMNEGKG NNVSDADIRA IKHSERRLRN HFLPQSLFSH CGFEQAFNYK YLRIMRIAVH PQIQQQGIGA QFIHYIELLA KEQGVDFIGA SFGVNPELLS FWLNAGFSTA RIGFTKDKAS GEHSALLIKG LVVKSKQEQQ SFKRNFYQSF DYLLLEEYRA LTTELVFLLL RQNSKGDVSA LSERDIANVQ AFSRGERLYS SCCYSLYLWL KQDLLSETKC HSTEVLQQSL VLVARLIQKH DSDSVCQQFG LTGKKMLNNH IKNYVHLRLN TAIN
|
| |