| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1031 |
|---|
| Symbol | ccmD |
|---|
| ID | 3518343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 1058039 |
|---|
| End bp | 1058272 |
|---|
| Gene Length | 234 bp |
|---|
| Protein Length | 77 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637283496 |
|---|
| Product | heme exporter protein CcmD |
|---|
| Protein accession | YP_267780 |
|---|
| Protein GI | 71277758 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3114] Heme exporter protein D |
|---|
| TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTTA ATAGTTTTAG CGATTTCATC AATATGGGCG GTTATGGCTT TTATGTCTGG
CTTTCTTTTG GTGCTGCCGC TTTGATACTT ACACTTTTAT TGATCAGCTC TAAAGCGGAT
CATCAGAAAA TCATCACCCA AATAGCTAAG CGTAAGCAGC GAGAAGACAA ACTCCGTCAA
GCTAAAGCAC TACGTAAGCA ACAAAATAAA GAATTAAACG AGGTAATTGA ATAA
|
|---|
| Protein sequence | MQFNSFSDFI NMGGYGFYVW LSFGAAALIL TLLLISSKAD HQKIITQIAK RKQREDKLRQ
AKALRKQQNK ELNEVIE
|
|---|
| |