Gene CPS_0971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0971 
Symbol 
ID3523354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp976056 
End bp977084 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content41% 
IMG OID637283436 
Producthypothetical protein 
Protein accessionYP_267720 
Protein GI71278705 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1509] Lysine 2,3-aminomutase 
TIGRFAM ID[TIGR00238] KamA family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGCAGA TAATAACCCA AATTGATCAT GATTTGCATC TTTGTGATGA AAAATCATGG 
CAAAAAGACT TACGTGATGT AGTGACTGAG CCAGAAAAAC TGTTAACACT GCTGAATATT
GCTCCTGATG ACTATTTACA GCATTTTAAA GCGCGTAAAT TATTTCCCGT GCGTGTGCCC
CTTTCATTTA TCAAACGCAT GAAAAAAGGT GACTTTGACG ATCCGCTACT TAAACAAGTG
ATGCCGCTAT CTAGCGAGTT TTTACTCTCA GATGGTTACA CTGCGGATCC CTTAAACGAA
CATGATACCG TTGCTGAAGG TTTATTACAT AAATACAAAA GTCGGGTATT AATGATAGTT
AAAACAGCCT GTGCTATTAA TTGTCGTTAT TGCTTTCGCC GTCACTTTCC CTATCAAGAT
AACAGCCCTA ATAAAAAGCG CTGGCAAAGC GCCCTTGACT ATATTGCTGC TCATAATGAA
ATAAGTGAGG TTATTTTCAG TGGTGGCGAT CCTTTAATGG CCAATGACGA CCATTTAGCA
TGGCTAATTG AACAGATAGA GCAAATCCCC CATGTATCGC GTTTACGTAT TCATAGCCGT
TTACCTGTAG TAATACCCAA TAGGATTACA GCCAAGCTGG TGACACTTTT GAAGTGCTCA
CGTTTAAAAG CCACTATGGT ATTGCATATC AACCACCCCA ATGAAATTAA CCAAGAGTTA
ATAGAGGCGC TTGAGCCGCT TCGTGAAGCA CGTATACCAC TATTTAACCA AAGTGTGCTT
TTACGTGGAA TAAATGACGA CGCACAAGTA TTAATTAACT TAAGTGAGGC ATTATTTGAT
GCTGGTATTC AACCCTACTA CTTACATCTT TTCGATGCAG TACAAGGCGC AGCTCACTTC
GATATTGCGG AAGCAGATGC AGTAGCGATT GTTAAAACTA TGCTCGCAAG CTTACCGGGA
TTTTTAATGC CTAAATTGGT GCGAGAAATT GCCGGACAAG CTAACAAAAC GCCGATCAAT
CTGGCATAA
 
Protein sequence
MPQIITQIDH DLHLCDEKSW QKDLRDVVTE PEKLLTLLNI APDDYLQHFK ARKLFPVRVP 
LSFIKRMKKG DFDDPLLKQV MPLSSEFLLS DGYTADPLNE HDTVAEGLLH KYKSRVLMIV
KTACAINCRY CFRRHFPYQD NSPNKKRWQS ALDYIAAHNE ISEVIFSGGD PLMANDDHLA
WLIEQIEQIP HVSRLRIHSR LPVVIPNRIT AKLVTLLKCS RLKATMVLHI NHPNEINQEL
IEALEPLREA RIPLFNQSVL LRGINDDAQV LINLSEALFD AGIQPYYLHL FDAVQGAAHF
DIAEADAVAI VKTMLASLPG FLMPKLVREI AGQANKTPIN LA