Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0971 |
Symbol | |
ID | 3523354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 976056 |
End bp | 977084 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637283436 |
Product | hypothetical protein |
Protein accession | YP_267720 |
Protein GI | 71278705 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1509] Lysine 2,3-aminomutase |
TIGRFAM ID | [TIGR00238] KamA family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGCAGA TAATAACCCA AATTGATCAT GATTTGCATC TTTGTGATGA AAAATCATGG CAAAAAGACT TACGTGATGT AGTGACTGAG CCAGAAAAAC TGTTAACACT GCTGAATATT GCTCCTGATG ACTATTTACA GCATTTTAAA GCGCGTAAAT TATTTCCCGT GCGTGTGCCC CTTTCATTTA TCAAACGCAT GAAAAAAGGT GACTTTGACG ATCCGCTACT TAAACAAGTG ATGCCGCTAT CTAGCGAGTT TTTACTCTCA GATGGTTACA CTGCGGATCC CTTAAACGAA CATGATACCG TTGCTGAAGG TTTATTACAT AAATACAAAA GTCGGGTATT AATGATAGTT AAAACAGCCT GTGCTATTAA TTGTCGTTAT TGCTTTCGCC GTCACTTTCC CTATCAAGAT AACAGCCCTA ATAAAAAGCG CTGGCAAAGC GCCCTTGACT ATATTGCTGC TCATAATGAA ATAAGTGAGG TTATTTTCAG TGGTGGCGAT CCTTTAATGG CCAATGACGA CCATTTAGCA TGGCTAATTG AACAGATAGA GCAAATCCCC CATGTATCGC GTTTACGTAT TCATAGCCGT TTACCTGTAG TAATACCCAA TAGGATTACA GCCAAGCTGG TGACACTTTT GAAGTGCTCA CGTTTAAAAG CCACTATGGT ATTGCATATC AACCACCCCA ATGAAATTAA CCAAGAGTTA ATAGAGGCGC TTGAGCCGCT TCGTGAAGCA CGTATACCAC TATTTAACCA AAGTGTGCTT TTACGTGGAA TAAATGACGA CGCACAAGTA TTAATTAACT TAAGTGAGGC ATTATTTGAT GCTGGTATTC AACCCTACTA CTTACATCTT TTCGATGCAG TACAAGGCGC AGCTCACTTC GATATTGCGG AAGCAGATGC AGTAGCGATT GTTAAAACTA TGCTCGCAAG CTTACCGGGA TTTTTAATGC CTAAATTGGT GCGAGAAATT GCCGGACAAG CTAACAAAAC GCCGATCAAT CTGGCATAA
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Protein sequence | MPQIITQIDH DLHLCDEKSW QKDLRDVVTE PEKLLTLLNI APDDYLQHFK ARKLFPVRVP LSFIKRMKKG DFDDPLLKQV MPLSSEFLLS DGYTADPLNE HDTVAEGLLH KYKSRVLMIV KTACAINCRY CFRRHFPYQD NSPNKKRWQS ALDYIAAHNE ISEVIFSGGD PLMANDDHLA WLIEQIEQIP HVSRLRIHSR LPVVIPNRIT AKLVTLLKCS RLKATMVLHI NHPNEINQEL IEALEPLREA RIPLFNQSVL LRGINDDAQV LINLSEALFD AGIQPYYLHL FDAVQGAAHF DIAEADAVAI VKTMLASLPG FLMPKLVREI AGQANKTPIN LA
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