Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0935 |
Symbol | |
ID | 3521978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 939721 |
End bp | 940752 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637283400 |
Product | putative polyhydroxyalkanoate depolymerase |
Protein accession | YP_267684 |
Protein GI | 71281506 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTTGGCA CTAAAGTACC ATACAGAGCT ACGTGGCATT GCGCCATTAT TGTCATACGA CAAAACCTGA ATATTGATAC TATGTTACAT AAATTAAAGC CACTCTTGTG GACGTTCTTA TGCGGCCTTA GTTGTTCCGC AATTGCTACC TCTCATCCAT TAGAAAACTT TCAGCCTTTA ACTGATTTTG GTGATAACCC TGGCAACTTA GCGGCAAGTT ACTTTCAACC GACCAAGCAA TCTAAATCCC TTGTGGTATT TCTACACGGA TGCGTGCAGC AAGGTGAAAC CTTAGCAAAA CAAAGTGGCT TTGTTTCGCT TGCTAAACAA CATAATTTCA CTCTGTTACT ACCACAGCAA AGTAAAAAAA ATAATGTTAC CTCCTGTTTT AATTGGTTCT CAGAGCAAGA TAGCGACAAG GATCAAGGGG AGGTGTTGTC GATCAAAAAT ATGATCCTCG CACTAAAGGC GCAGTCAGAA TTTGACCATG TATTTATTGC AGGCCTTTCC GCTGGCGGTG CTATGACCAG TGCATTGTTA GTTCACTATC CTGAACTCTT CTCTGCTGGC GCTGTTATTG CGGGTTTACC TTATCCTTGT GCTAATAATT TGGCTAAAGC AATTTCTTGC ATGAGAAATG GCCCTTCACA GTCATCAGTC GAACTAGCTA GCTTAGCAAA GCACGGTAAT GAAGCCGTTA AACAATGGCC GAGGCTTATT GTCATCACGG GCAGTAAAGA TAAAGTTGTC AATCCCAAAA ATTCCCAGAG CTTAGCTTTG CAGTGGTCAA AGCTTTCAGA AACTGCATTG AAACCAAGTA AATCCTTACT CGCAGATTAT CAGCAAACAC TTTGGCAAAA TAAAGAAGAG CCTGTGCAAG TTAAGTTGGT TGAAATTAAT GAAATTGGTC ACGGTTTAAG CGTTAATTCT AGTTACAAAA ATAGAGATGC GAGTGCGGAC TTTTTATATG AATCTTCGTT TGATAGTGCT ATGAATATCA TCGAATTTTG GGGTGTAAAA GGTAAAAGTT GA
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Protein sequence | MLGTKVPYRA TWHCAIIVIR QNLNIDTMLH KLKPLLWTFL CGLSCSAIAT SHPLENFQPL TDFGDNPGNL AASYFQPTKQ SKSLVVFLHG CVQQGETLAK QSGFVSLAKQ HNFTLLLPQQ SKKNNVTSCF NWFSEQDSDK DQGEVLSIKN MILALKAQSE FDHVFIAGLS AGGAMTSALL VHYPELFSAG AVIAGLPYPC ANNLAKAISC MRNGPSQSSV ELASLAKHGN EAVKQWPRLI VITGSKDKVV NPKNSQSLAL QWSKLSETAL KPSKSLLADY QQTLWQNKEE PVQVKLVEIN EIGHGLSVNS SYKNRDASAD FLYESSFDSA MNIIEFWGVK GKS
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