Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0894 |
Symbol | |
ID | 3521718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 897465 |
End bp | 898352 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637283359 |
Product | ISCps3, transposase orfB |
Protein accession | YP_267643 |
Protein GI | 71281247 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.274817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAACGG TTTCTTGCAG AGGAACATCA AGTCGATATC GATTCATCGA AAAACTCAGA GCCGACATAA AAGTTACGCG ATTACTGACG TTTTTTGATG TATCTAAAAG TGGTTATTAT GACTGGCGTG AGCGCCAACC GAGTGCTAGA GCCATAGAAG ATGTTGAGCT TAAACATAAA ATACAGCAAA TTTTCAAAGA GAATAGAGGA CGATATGGGA GCCCTCGAAT ATTTAAGGCC TTACAAAAGC AAGGGTACAA CATAGGTAAA AAACGTGTCG AACGTTTGTA TCGTGCGCTT GGTTTGGTTG CCAGAGTAAT GCGCGTGACG ACACGTTCAG CCTTTTATAA ACGCTTCCTA ACGACAGGTA AAAACTTACG ACCTGATGGC GAAGTCCCAT TGGCTAAAGA TAAGGTCTGG GTAGCTGATG TCACGTATTT GAAAGTTAAA GGCGTATGGC GTTATTTGTC GGTCATCATG GATTTATATT CACGGCGCAT TATTAGCTGG AGTTTGGATA AAAATAGGAC GATGGAAGTG ACCAAGCGTA CATTGCAAAA TGCAGTTAAG AAACGCAAAC CATCCGGTGA CTTAATGCTC CACACTGATA GAGGCGTAGA ATATCGTGGG CACATTTACC AGAAAGCATT GAAACGACAT GGGATCACTC ATAGTTTGAG TAGAGCTGGA AAATGTACTG ATAATGCGCA TATGGAGTCA TTTTTCCATT CAATGAAGAC GGAAGTTATT CGTGGTAATG TGTTTAAAAG TGATAAAGAA CTGCGAGGAA CACTTGGCAA CTACATTAAC AAATACTACA ATGTTTCGAG GATGCATTCA GGGATAAACT ATTGTTCTCC AATAGAATAT GAAGCCCTGG CAGCGTAA
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Protein sequence | MATVSCRGTS SRYRFIEKLR ADIKVTRLLT FFDVSKSGYY DWRERQPSAR AIEDVELKHK IQQIFKENRG RYGSPRIFKA LQKQGYNIGK KRVERLYRAL GLVARVMRVT TRSAFYKRFL TTGKNLRPDG EVPLAKDKVW VADVTYLKVK GVWRYLSVIM DLYSRRIISW SLDKNRTMEV TKRTLQNAVK KRKPSGDLML HTDRGVEYRG HIYQKALKRH GITHSLSRAG KCTDNAHMES FFHSMKTEVI RGNVFKSDKE LRGTLGNYIN KYYNVSRMHS GINYCSPIEY EALAA
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