| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0669 |
|---|
| Symbol | |
|---|
| ID | 3518390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 670653 |
|---|
| End bp | 671822 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637283134 |
|---|
| Product | lipid-transfer protein |
|---|
| Protein accession | YP_267419 |
|---|
| Protein GI | 71278797 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAG TAATCGTAGC CGGCGTCGGT ATGACAAAGT TTTGTAAACC GGGCCAACAA
GAACCTTATC GTGTGATGGC TGCTACAGCG ATAAAGATCG CATTGGCTGA TGCAGGCATT
GATGCAACAA AAATTCAACA AGCCTTTGGT GCTTATATTT ATGGTGATAG TACCTGTGCC
CAACATGCCT TTTATGATGT TATTCAAAGT GGTATTCCTG TGGTAAACGT CAACAATAAT
TGCTCTAGTG GTTCCACTGC GCTGTTTTTA GCGAGACAAG CGGTGCTCTC GGGCGAAATT
GAATGTGCGT TGGCTTTTGG TTTCGAAGAA ATGCAACCAG GCGCATTGGG CTCAGGTTGG
GACGATAGAG AAAGTCCTTT TGATCGAGCA AAACCAGTGT TAGAAAAGTT TAATGCACCC
GATGGACCTC TGGCATTGCA AGCCTTTGGT GCTGCAGGGC GTCATTATAT GGATTTATAT
GGTGCTGAAG CTGACATTTT TGCCAAAGTC TCTGCAAAAT CTCGCAGTCA TGCGGTGCAT
AACCCTTATT CTATGTTTAC TAAACCGCTG ACCTATCAAG ATGTGCTCAA TGACAAAGTG
ATCTATGACG GTTATATGAC ACGTCTAATG GCCTGTCCTC CTACTTGTGG CGCGGCGGCG
ACTATTGTCT GTAGTGAAGC TTTCGCCGCA AGAAATGGCA TCACTAATGG GGTGAAAATT
CTAGCGCAAG CCATGGCAAC AGATACAGAG AAGTCGTGGC AAGATCCTAT TTATGCGGCG
GGTAAGGGCA TGACCGAAAT AGCAGCCCAA AAAGTATATA ACATGGCCGG CATTAGCCCA
GAAGACATTG ATGTGATTGA ATTACATGAC TGTTTTACCA CGAATGAAGT AATCAGCTAT
GAAGGTTTAG GGCTTTGTCC AGAAGGTGGC GCGGCTGAAT TTATCGACAA GGGCGATAAT
ACTTATGGCG GGAAATTTGT TATTGGTCCA TCTGGGGGCT TGATGTCCAA AGGTCATCCT
ATTGGCGCAA CAGGGCTAGC ACAATGTACT GAGTTAACTT GGCATCTACG TGGTCAAGCA
GGCGCACGGC AAGTTGAAGG TGCTAGACTG GCTTTACAGC ATAATGTTGG TCTTGGTGGG
GCAGTAGTTG TAACGCTTTA CGGAAAATAA
|
|---|
| Protein sequence | MSQVIVAGVG MTKFCKPGQQ EPYRVMAATA IKIALADAGI DATKIQQAFG AYIYGDSTCA
QHAFYDVIQS GIPVVNVNNN CSSGSTALFL ARQAVLSGEI ECALAFGFEE MQPGALGSGW
DDRESPFDRA KPVLEKFNAP DGPLALQAFG AAGRHYMDLY GAEADIFAKV SAKSRSHAVH
NPYSMFTKPL TYQDVLNDKV IYDGYMTRLM ACPPTCGAAA TIVCSEAFAA RNGITNGVKI
LAQAMATDTE KSWQDPIYAA GKGMTEIAAQ KVYNMAGISP EDIDVIELHD CFTTNEVISY
EGLGLCPEGG AAEFIDKGDN TYGGKFVIGP SGGLMSKGHP IGATGLAQCT ELTWHLRGQA
GARQVEGARL ALQHNVGLGG AVVVTLYGK
|
|---|
| |