| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0649 |
|---|
| Symbol | pfkA |
|---|
| ID | 3519669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 647258 |
|---|
| End bp | 648301 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637283114 |
|---|
| Product | 6-phosphofructokinase |
|---|
| Protein accession | YP_267399 |
|---|
| Protein GI | 71278146 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0205] 6-phosphofructokinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATA AAAAAACAAC GTCAATTAAG CGCATTGCAC TATTAACCAG TGGCGGTGAT
GCTCCAGGGA TGAATGCAGC GATACGTTCA GTTGTATTAG CAGCTCATCA TTATCATATT
GAAGTCATTG GTTTTTATCA TGGTTATAAC GGCTTGGTAT GTGAAGAGCA TATCGCCATG
GCTGAACCGT TAACCTTGTT AAAAGTAAAT AGCATTATTC ACCTCGGTGG TACGATATTG
AAGAGTGCTC GTTGTCAGTT AATGCATGAA GCAAAAGGCT TACAGTTAGC CGCGGATACC
TTAAATGATA AAAATATCGA TGCACTTGTT GTTATAGGTG GTGATGGATC TTTTTCTGGA
TTGCTGGCGC TTCAAGCGTA TTGGTCAGGT CAGATGATTG GAATTCCGGG AACGATAGAT
AATGATCTTG ATGGGACTGA TTACACTATT GGCTTTGCCA CAGCAGTAAA CACTGGCATA
GAAGCAATTG ACAAAATTCG TGATACCGCA GATGCTTTTG AACGGATATT TATTGTTGAG
TTGATGGGGC GACATTGTGG CCATATAACG TTCAATGTTG GTATTGCTTG TGCGGCAGAG
CAGGTATTAT CTTTTGAAAA TTTTAACGCG AATGAGCAGT CGTCAAAATT ACAGCAACTT
GCGACAGAAA TTACCACAGC AAAGAAAAAT CGTCATTCAA GTTATATTAT TGTTATCGCA
GAAAACCTGT GGCCAGGTGG CGCTGTAGAA TTAGCGAGAC AATTGCACCT ACAAGCTGAT
ATTGAGTGCA CGCCCTGTAT ATTAGGCCAT ATACAGCGAG GTGGCTCACC CATTGCTAAA
GATAGAATAC TCGCGACAAA AATGGGCGTA GCTGCTGTGC AAGCACTTAT AGACGGTGAA
TCCAATATTA TGGTGGCAGA GCAAAATAAT GCGATGAATT TTATTACGCT GGATGAGGCA
ATTAAGCACA AAAAAGTAGT AAGCAAACAG CTCATTGATG CACAACAAAA TATCTTGGCG
TTAACAGCGC AAACCCAGTG TTAA
|
|---|
| Protein sequence | MNNKKTTSIK RIALLTSGGD APGMNAAIRS VVLAAHHYHI EVIGFYHGYN GLVCEEHIAM
AEPLTLLKVN SIIHLGGTIL KSARCQLMHE AKGLQLAADT LNDKNIDALV VIGGDGSFSG
LLALQAYWSG QMIGIPGTID NDLDGTDYTI GFATAVNTGI EAIDKIRDTA DAFERIFIVE
LMGRHCGHIT FNVGIACAAE QVLSFENFNA NEQSSKLQQL ATEITTAKKN RHSSYIIVIA
ENLWPGGAVE LARQLHLQAD IECTPCILGH IQRGGSPIAK DRILATKMGV AAVQALIDGE
SNIMVAEQNN AMNFITLDEA IKHKKVVSKQ LIDAQQNILA LTAQTQC
|
|---|
| |