| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0639 |
|---|
| Symbol | |
|---|
| ID | 3520379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 637472 |
|---|
| End bp | 638674 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637283104 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_267389 |
|---|
| Protein GI | 71279917 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAG TAGTAAATAA GTTTACCTTA ACATTAATCA GTGCAGCAAT TTTAGCAGCT
CCTACCGCCT TTGCTGGTGA AACAGAACAC GGCAACAGCA TTACTGAAGC GTTAAGTGAG
AGCACAGTTA AAGTTAATTT ACGCGCTCGT TACGAAGGCG TAGATCAAGA CGGTATAGAC
AAAAAGGCTG CAGCGTTAAC GCTAAAAAGT CGTATCACAA TTGACACAGG CAGTTACAGT
AACTTCTCGC TTGGTTTAGA AGTTGATAAA GTAGATGCTC TAGTAGATGA CTATAATAGT
ACTCAAAATG GTAACACTGA ATATCCAGTA GTTGTTGATC CACAAAGTAC TGACGTAAAC
CAAGCTTTTA TCAAGTACGC AAACAATGGC TTTAGTGCCG TAGTTGGTCG CCAACGTGTT
TTACACAACA ATCAGCGTTT TGTTGGTGGT GTAGGCTGGC GTCAAAATGA ACAAACATAT
GATGGAGTTC GCGCACAATA TAAAGCGGAT GCTTTCTTAG CTGACTATAG CTACATCCAG
AACATCAATG ATATTAAAGG CGGAAACGTT AAAGGTGATT TCCACTTAGT TAATGCGAAG
TACAACATTA ACAAAAGTCA TAAATTAGCG GGTTTTGCTT ACCTTCTAGA CTATGATGCT
GTCGCTAACT ATAAAAACTC TAGCAGCACA GTAGGTGCTC TATATAATGG CAAGTTTGGT
AAGTTTTTAG TAAATGCTAG CCTCGCGACT CAAAGCGACA ATGGTGATAA CCCAATGAGC
TATTCAGCAA TGTATATTAA TGCTGAAGCA GGTTATAACT TTGGTCAAGT AACTGTTTTA
GGTGGTTATG AATTATTGGG TAGTGATGAT GGTAAAGTTG CATTTAACAC GCCATTAGCA
ACTAAGCATA AATTCAACGG TTGGGCTGAT AAATTCTTAG GTACTCCAAA AGAAGGTCTA
CAAGATATTT ATTTAACTGC CAAAGGTAAA GTGTCAGGCG TTAAATGGGC AGCAACTTAC
CATGATTTCT CATCGGATGA AGGTAGCATT GATTTTGGTA ACGAGTTAGA TTTAGTTGCC
ACTTACCAAA TTAACAAAAA CTATGGTGTT TTAGTTAAAG CTGCTAACTA TAGCGAAGGT
GATTCAGGCA TAGCTCCAAC TGATACCAAT AAACTTTGGG TTCAAATGAC AGCTAAGTTC
TAA
|
|---|
| Protein sequence | MKTVVNKFTL TLISAAILAA PTAFAGETEH GNSITEALSE STVKVNLRAR YEGVDQDGID
KKAAALTLKS RITIDTGSYS NFSLGLEVDK VDALVDDYNS TQNGNTEYPV VVDPQSTDVN
QAFIKYANNG FSAVVGRQRV LHNNQRFVGG VGWRQNEQTY DGVRAQYKAD AFLADYSYIQ
NINDIKGGNV KGDFHLVNAK YNINKSHKLA GFAYLLDYDA VANYKNSSST VGALYNGKFG
KFLVNASLAT QSDNGDNPMS YSAMYINAEA GYNFGQVTVL GGYELLGSDD GKVAFNTPLA
TKHKFNGWAD KFLGTPKEGL QDIYLTAKGK VSGVKWAATY HDFSSDEGSI DFGNELDLVA
TYQINKNYGV LVKAANYSEG DSGIAPTDTN KLWVQMTAKF
|
|---|
| |