| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0634 |
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| Symbol | astD |
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| ID | 3522560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 630856 |
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| End bp | 632334 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283099 |
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| Product | succinylglutamic semialdehyde dehydrogenase |
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| Protein accession | YP_267384 |
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| Protein GI | 71282088 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCACG CAAATCCAGT TCAATTTATT AATGGTCAAT GGCAAGCAGG CTTAGGTCAT
GATGTTAGCT CATCTAACCC TGCTCGTAAT GAAGTCATTT GGCAAGGTAA AACTGCCAGT
AAAGATCAAG TAAACGATGC CGTTTTAAGT GCTCGTCAAG CATTTGAAAG CTGGGCAAAT
ATCAGCTTAG AAGCACGTGT TGCCGTGGTA ACAAAATTTG CTGAATTATT AGCTGAGAAC
AAAGATGCAT TAGCAACAAC TATTGCCTTA GAAACTGGTA AGCCAAAGTG GGAAACTACC
GGTGAAGCTG GCGCGATGGT AGCTAAAGTC GCTATTTCAC TGAAAGCTTA CAACGAGCGT
ACTGGCACAG TTGAAAACCC TATGCCTGGC GCTAAAGCCT TTATCCGTCA TAAGCCTCAT
GGTGTAGTTG CTATTTTTGG TCCTTATAAC TTCCCTGGTC ACTTGCCAAA TGGCCACATA
GTACCAGCAT TAATTGCTGG TAATACTATC GTATTTAAGC CAAGTGAATT AACGCCTCGC
GTTGCACAAG AAATGTTAAA ACTTTGGGAA CAGGCTGGTT TACCTAACGG TGTTATCAAC
CTAGTTCAAG GTGAAGTAGA AACAGGTAAA GCCCTTGCTA GCCATAAACT TATTGATGGT
TTATTTTTCA CAGGTAGCTC TAATACTGGT CATATATTAC ATGAACAATT TGCCGGTCAA
CCGGGTAAGA TACTTGCGCT AGAAATGGGT GGTAATAACC CGCTTGTTGT TAAAGATGTT
AGCGACATTG ATGCGGTTGT ACATGACATT GTTCAATCTG CATTCGTTAC TACTGGCCAA
CGTTGTACTT GTGCGCGTCG TTTATTCATT GAAGCCAATG AACAAGGTGA TGCTATTTTA
GCCCGTCTTA TCGAAGTAAC CAAAAACTTA ACTATTGGTT ACTACGATGA CGAAGCGCAA
CCATTCATGG GCTCTATGAT TTCAGAAAAA GCGGCTTTAA GCTTAGTAGA TGCACAAGCT
AAATTACTCG CTTTAGGCGC AAAGTCTGTT TTAGATCTTA AACATCTAGA AGTAGGTACT
GGTTTTGTTT CTCCTGGTAT TATCGATGTT AGTGACATTA TTGCCGACAT ACCTGATGAA
GAATATTTCG GTCCACTAGT TAAGTTATAC CGTTACAACG ATTTCGATAA AGCGATTGAT
GAAGCTAATA ATACTGGTTT TGGTCTTTCT GCCGGTTTGT TATCTGATAG TGAAGCGTCA
TACAATCACT TCTTTACTCG CATTCGTGCT GGTATCGTTA ACTGGAACAA ACCAATTACA
GGTGCAAGCA GCGCTGCACC GTTTGGTGGT ATTGGTGCTA GTGGTAATCA CAGAGCCAGC
GCATTTTATG CCGCTGATTA TTGTGCCTAC CCTATTGCTT CAGTAGAAGC TGAGAAAGTA
AGTTTACCTG AAACGTTAAC ACCTGGTATG AAATTCTAA
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| Protein sequence | MSHANPVQFI NGQWQAGLGH DVSSSNPARN EVIWQGKTAS KDQVNDAVLS ARQAFESWAN
ISLEARVAVV TKFAELLAEN KDALATTIAL ETGKPKWETT GEAGAMVAKV AISLKAYNER
TGTVENPMPG AKAFIRHKPH GVVAIFGPYN FPGHLPNGHI VPALIAGNTI VFKPSELTPR
VAQEMLKLWE QAGLPNGVIN LVQGEVETGK ALASHKLIDG LFFTGSSNTG HILHEQFAGQ
PGKILALEMG GNNPLVVKDV SDIDAVVHDI VQSAFVTTGQ RCTCARRLFI EANEQGDAIL
ARLIEVTKNL TIGYYDDEAQ PFMGSMISEK AALSLVDAQA KLLALGAKSV LDLKHLEVGT
GFVSPGIIDV SDIIADIPDE EYFGPLVKLY RYNDFDKAID EANNTGFGLS AGLLSDSEAS
YNHFFTRIRA GIVNWNKPIT GASSAAPFGG IGASGNHRAS AFYAADYCAY PIASVEAEKV
SLPETLTPGM KF
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