Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0576 |
Symbol | |
ID | 3520713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 576233 |
End bp | 577540 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637283041 |
Product | sigma-54 dependent DNA-binding response regulator |
Protein accession | YP_267326 |
Protein GI | 71280249 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACAAA TATTAATCGT TGATGATAAC CCCGATATAC TCGAAGCCCT TGAGTTGTTA TTAAGTTTGC ATGGTTATGC TGTGCTGACG GCTGAGAATG AGAAACAAGC ATTGTTGGCT GTATCTCATC AACGTGTTGA TTTAGTTATT CAAGATATGA ATTTCGCGCA AGGTATCACC TCTGGAAAAG AAGGCAAATC ACTATTTACT GCTTTGAAAG CACTAAATAG TGATTTGCCT ATCATCCTAA TTACCGCGTG GACTCAATTA GAAACAGCCA TATCGTTGGT GAAAAGTGGC GCAACGGACT ACTTACAAAA ACCTTGGGAT GATGTAAAAC TGCTAGATTT AGTGGCAAAA TATAGCCTGA ACTCCAAGAT AAACCAAGAT AAGAACAATC AAAGCGTGAG CAATCAAAAG CCCGCGGATG ATTTCATTTA CAAAAGCCAA GAAATGCAAA CCTTGATATC TCAAGCGAGC AAAGTAGCGG GTGCAAACGT AAATGTATTA ATTACCGGAG CTAATGGTGC AGGCAAAGAG AAGCTTGCCG ATTATATTCA CCAACAATCT CCGCGTTATA ACAGTGCTTT TATTAAAGTA AATATGGGGG CTTTACCTCA TGACTTAATG GAAGCAGAAC TTTTTGGTGC GGAAAAAGGT GCATTCACGG GAGCCAATCA AGCGAGGATT GGTCGTTTTG AAGCCGCGGA TGGCGGCACA TTGTTTTTAG ATGAAATCGC TAATCTGACC TTAGCAGGTC AAATGAAATT ACTCAGAGTA TTGCAAACCG GTGAATTTGA ACGCTTAGGG GCTAACGCAA CATTGAAAGT GGATGTGAGA GTACTTAGTG CCACTAATGC CGATTTACGT TTAGCTGTTC AGCAAGGTAC TTTTCGGGAA GACTTATATT ATCGGTTAAA TGTTATAGAG TTAAATTTAC CTGATTTAGC GTACAGAAAA GCTGACATTG TTCCGCTAGC ACAATACTTT ATCGGCAATG ATTGTTCACT GAGTGATGAA GCAGCACAAA CGTTAACGGA TTATACTTGG CCGGGTAATG TACGTGAATT AGAGAATGCC TGTAAGCGCG CGTTAGTTTT TGCTAATAGT AGTACCTTAA CGGCAAGTGA CTTTCAATTG GCTTCGAGTC AAAAAGAAGC CGCGTTAGGT GAAAAGGGAA ATATTGAGCA GGTACTGATT AAGCATAAGG GCGTGATCAA ACATACGGCA CTCGAGTTAG GGTTAAGTCG ACAAGCTTTA TACCGCCGTA TAGAAAAATA TCAAATAGAT GTAGGCTCAT TATGTTAG
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Protein sequence | MPQILIVDDN PDILEALELL LSLHGYAVLT AENEKQALLA VSHQRVDLVI QDMNFAQGIT SGKEGKSLFT ALKALNSDLP IILITAWTQL ETAISLVKSG ATDYLQKPWD DVKLLDLVAK YSLNSKINQD KNNQSVSNQK PADDFIYKSQ EMQTLISQAS KVAGANVNVL ITGANGAGKE KLADYIHQQS PRYNSAFIKV NMGALPHDLM EAELFGAEKG AFTGANQARI GRFEAADGGT LFLDEIANLT LAGQMKLLRV LQTGEFERLG ANATLKVDVR VLSATNADLR LAVQQGTFRE DLYYRLNVIE LNLPDLAYRK ADIVPLAQYF IGNDCSLSDE AAQTLTDYTW PGNVRELENA CKRALVFANS STLTASDFQL ASSQKEAALG EKGNIEQVLI KHKGVIKHTA LELGLSRQAL YRRIEKYQID VGSLC
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