| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0575 |
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| Symbol | |
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| ID | 3522691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 574720 |
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| End bp | 575934 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637283040 |
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| Product | putative ABC transporter, permease protein |
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| Protein accession | YP_267325 |
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| Protein GI | 71282218 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTA AAGCACTACT TAAGTCCTTA TTATTAAGAA AATTTACTAC GGGGTTATTA
ATCTTACAAT TAGCGATAAC GTTAGGTTTG CTGATTAACA GTGTTATTTT AGCCGTGGAT
ACTAACAATA AATTGGCCCA AGATACGGGC CTAGATATAG ACAATACCTT GATTGTTTCA
TTGCATCCGA CATCGGGTGA ATACCGTAAC TTGGACTATT ATCGATCAAT TGTGAGTCAA
GATTTACACC AATTAAATCA ACTTTCAGGT GTTGAAAGTG TTTCACTCAT GAATCAACTA
CCCATAAATA CAAGAGGCAT GTTAGGTAAT GTATATGATC TAGATGACCC AGAAATTGTT
CGTCGTGATC TATATCTGCA AGATTCAAAG ATTTTTCTCA CTAATGAGGA GCTTAGCAAT
ACGCTAGCAT TGGCATTACT TGAAGGTCGT TTTTTAACGA AAGATGATCA ACTTGATTTT
GGTAGTGATG AAAATGGTAA TGTACTGATT ACTGAGTCAC TTAAAAAAGC GCTATATGGT
GAAGGTTCGG CACTAGGACA AGAAACTAAT AATGGTCGCA TTGTAGGCGT GGTAAAAGAT
ATTATGCTTG ACCCGACGTT ACCCATAGAC AAGCAATACG GTGTTTTTGG TAATCGAGTA
ATGGAGTTTA TCTTCACTGG TCGATATTAC TTACTAAGGG TGATTCCAGG TCAAGTGGAG
GCAGTGCGTA ATAAAGTTAG TGATACCATT TTAGCAGTCC AAGCCGAGCG TGATATCTAC
AGAATAATGA CTATGGCAGA GCATATGAAA CGCTTTTATA GCCATGATAA AGGTTTAGCT
GAGTTGTTCT TGCTGCTTTG TGGGCTAATG ATATTTGTTA CTGCTATTAG CAGCTATGCT
TACTCACAAT TTCATATTTC GCGTCAGAAA AAATACATAG GTATTAGACG TGCGTTAGGT
GCACGTAAAA AAGATATTCT TTTATATGTG CTCACGGAAA ACTGGCTGGT ATACAGTATT
GGTTGTGCGT TAGGTTTGGT GATGGCTTTT GGGTTTAATA TTTTATTAAG TCAGTATATT
AGCTTGAGTA AACCAGATAT TATGTTGTTT ATATTAGCGA GTGTGGTCAT TTTTATCGCA
GGTACAATCG CAACTTTGAT CCCCGCAATA AAGACCAGTA ATATTCCACC AGTGATTGCG
ACTAGAACAG TGTAG
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| Protein sequence | MNIKALLKSL LLRKFTTGLL ILQLAITLGL LINSVILAVD TNNKLAQDTG LDIDNTLIVS
LHPTSGEYRN LDYYRSIVSQ DLHQLNQLSG VESVSLMNQL PINTRGMLGN VYDLDDPEIV
RRDLYLQDSK IFLTNEELSN TLALALLEGR FLTKDDQLDF GSDENGNVLI TESLKKALYG
EGSALGQETN NGRIVGVVKD IMLDPTLPID KQYGVFGNRV MEFIFTGRYY LLRVIPGQVE
AVRNKVSDTI LAVQAERDIY RIMTMAEHMK RFYSHDKGLA ELFLLLCGLM IFVTAISSYA
YSQFHISRQK KYIGIRRALG ARKKDILLYV LTENWLVYSI GCALGLVMAF GFNILLSQYI
SLSKPDIMLF ILASVVIFIA GTIATLIPAI KTSNIPPVIA TRTV
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