| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0572 |
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| Symbol | |
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| ID | 3520057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 571278 |
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| End bp | 572549 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637283037 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_267322 |
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| Protein GI | 71279598 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCAAG GAACAAGCGG ACAGGATGAG GTTATAGCAA ACCCTAAAAA GGTAGCGCTG
AAGAAGATAC TGCTGACCCT ATCACTGATA TGTGCTTTGT CATACGTTAC TTTTCCAACG
TTGTCTCAGT GGTATTCATC AATACCGACC ATTGATCGTA AAAGCATCAA TATTGAAACC
GTGATCTTAG GTGATTTAAT TCGAGATATC GTTGTTTCTG GTAAAGCGGT GGCAGCAAAT
GCACCACAAC TTTATAGCAC TGAGATTGGC AAGATAACGT TATTAGCGAA ACCGGGTGAG
GCTGTGGCGT TAAATCAAAT AGTCGCTCGT TTAATGAGTC CTGAGTTAGA TGCTTTAATT
AAACAACAAC AATCAACACT AGAGCAACTG AGCATCAATG CTAATCGTGG TGTATTAGCA
GATAAAGAAG CACAACTTGA CCTTGAAAGT AATATGAACG CAGCACAATC AAAGTTGAAT
GTAGCTAAGC GTGAATTTCA GCGCGCAGAA ATTTCATATG GTAAACAAAT CATCAGTGAG
GTTGATTGGT TGAAAAGCCA AGATGCGGTC GCGGATGCAA AACGATTATT TGAGCATGCT
AAAAAAAGAG TATCGTTTTC AGTAGAGCGA TTACAATTTG AGAAACAGCA TAGAGACTTT
CTAGTACAAA AAGAAAAGCT TATCTTGGAA GAGCTGTCAC GTCGTCATGA TGAATTAGCA
ATCAAAGCAC CAGTCAAAGG TGTAGTAGGT AATTGGCTTG TTGCACAGAA AAACACTATT
GCCGCTAATA CTGCAATTAT GACAATTGTC GACTTATCTG AATATGAAGC GGAGTTGAGT
GTTCCAGAGT TTTATGCAGA TGATTTAGGT ATTGGTTTAG AAGTTTCAAT GAAAATATCA
GGGGTTTCAG TACGCGGTGA AATCATTGCC ATTTCGCCTG AGGTGAAAGG TAACCAAGTA
ACGGTGAGAG CTAAAATAAA GAATTCACAG AATATTCAAT TAAGACAAAA TCAACGTATC
AATGCACGTA TAGAGTTTGA GAAAAAAGAA AATGTACTCA TGGTTAAACG CGGTGCTTTT
ATGGGATCTT TAGGTGGTAA GTTTATCTTC AAACTTAGTG AAGATAATTA TGCAGACAAG
ACAGCTATAA CGACTGGAAC GAGTAGTGTT GAATATATTG AGATCACATC GGGTATTGAC
GTTGGCCAGC AAGTTATTAC CTCGGATTAT GTAGATTTCA ATAAAGCAGA ACAAATTTAC
CTTGGTGGCT GA
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| Protein sequence | MIQGTSGQDE VIANPKKVAL KKILLTLSLI CALSYVTFPT LSQWYSSIPT IDRKSINIET
VILGDLIRDI VVSGKAVAAN APQLYSTEIG KITLLAKPGE AVALNQIVAR LMSPELDALI
KQQQSTLEQL SINANRGVLA DKEAQLDLES NMNAAQSKLN VAKREFQRAE ISYGKQIISE
VDWLKSQDAV ADAKRLFEHA KKRVSFSVER LQFEKQHRDF LVQKEKLILE ELSRRHDELA
IKAPVKGVVG NWLVAQKNTI AANTAIMTIV DLSEYEAELS VPEFYADDLG IGLEVSMKIS
GVSVRGEIIA ISPEVKGNQV TVRAKIKNSQ NIQLRQNQRI NARIEFEKKE NVLMVKRGAF
MGSLGGKFIF KLSEDNYADK TAITTGTSSV EYIEITSGID VGQQVITSDY VDFNKAEQIY
LGG
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