| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0521 |
|---|
| Symbol | |
|---|
| ID | 3523066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 518656 |
|---|
| End bp | 519522 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637282986 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_267279 |
|---|
| Protein GI | 71282591 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4240] Predicted kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTCAG ATTTTATTAA ACAACATAAG TTACCTGAAG AATTTAGGCT AACAGTAGAA
GAGCATTACA AACCACTAGC TGATCGCATT GTTAGACTCT TTAACAAAAA AAGTAATGCC
TATTTCGTCG GGATAAATGG CTGTCAAGGT AGTGGTAAAT CGACACTCAC CGACTTCATT
GCTGAATATT TGATAGCACA ATACCAACTT AATGTTGTCG TCATGTCTTT AGATGATTTT
TACTTATCGA GCACAAAGCG TAATCAATTA GCAGACGATA TTCACCCACT GTTATCAACT
AGAGGTGTTC CAGGCACGCA TGATATAACG GCCCTTAATC GGGTGTTAAG CCAATTATCA
GAGCACAGAA CAGGATTCTC AATTCCAAAG TTCAACAAAG CTATCGATGA ACCATGTCCC
CAAAGCCAAT GGATCTCAGT TGAAAAACCG GTAGACATTA TTTTATTAGA GGGTTGGTGT
TGGGGCGTAA CATCTCAAAC AGACGAGCAA TTACAAACAC CAATTAACGA CCTAGAATTA
CAACACGATG CAGAGGGTGA ATGGCGTAGT TACGTTAATC AACAACTTAA AACGGGTTAT
GAACCGCTTT ACAAAAAAAT GGACTTTTGG TTAGCATTAC AAGCGCCGTC TTTCGATTGT
GTTTATCAAT GGCGATTAGA ACAAGAGCAA AAATTACAAG CCAAAAACAT TGGCTTGTCT
CATTCAAAAG TCATGTCGCC TGCAGAGGTA TTAAACTTCA CTCACTATTT CCAAAGGCTT
ACCGTACACG GGAGTAATAC CCTTTCAAAT TCTGCAGATG CTGTTTTTCA TTTAGATAAT
ACTCGTCATA TTATAGATAT CCCTTAA
|
|---|
| Protein sequence | MLSDFIKQHK LPEEFRLTVE EHYKPLADRI VRLFNKKSNA YFVGINGCQG SGKSTLTDFI
AEYLIAQYQL NVVVMSLDDF YLSSTKRNQL ADDIHPLLST RGVPGTHDIT ALNRVLSQLS
EHRTGFSIPK FNKAIDEPCP QSQWISVEKP VDIILLEGWC WGVTSQTDEQ LQTPINDLEL
QHDAEGEWRS YVNQQLKTGY EPLYKKMDFW LALQAPSFDC VYQWRLEQEQ KLQAKNIGLS
HSKVMSPAEV LNFTHYFQRL TVHGSNTLSN SADAVFHLDN TRHIIDIP
|
|---|
| |