| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0486 |
|---|
| Symbol | |
|---|
| ID | 3519790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 491392 |
|---|
| End bp | 492639 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637282951 |
|---|
| Product | BNR repeat-containing protein |
|---|
| Protein accession | YP_267244 |
|---|
| Protein GI | 71279335 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.964495 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATTC TTATGAAAAA TATTAACAAC CGACTAAAGC TATTAATTTT GGTGACCTTT
ATCTTAAGCA CGGGCATTAG TCAGCAAGTG TTGGCTGAGC CCATGGATCA TAGTCAGCAT
CAAGGTCAAA AATCAGTAAA GCAAGCGAAG ACAATTTGTC AAAAAATTGC AGTGACATGT
GGAAAAACGG TTACCAGTGC TTTTGCACCT AACGGTGACT TTTGGCGAAT TTGGAGTCAA
CAAGATAACA TTTATTATCA AATTTCACCT GATAACGGTC AAAATTTTGG TATAGCTAAA
GCTGTTGGTA TAGCCAAAGA AAAGATATCA GCACGAAATG AGAATAGACC CAAAATAGCG
TTTGATTCAA AGCAAGGTGT CTATTTGTCG TGGGCTTCAC CGCGTGAGAA AAAATACACC
GCAGATATTC GATATAGTTA TTCCAGTGAT TACGGTAAAA CTTTTTCCAC GCCTATTACC
GTAAACGATG ATGGTTTGCT CACGGGACAT AGCTTTAATG AAATGGTAGT CAACGACGAA
GGCGACGTTA GCATCGTCTG GTTAGATGGT CGTTTAAAGC AAAGGAAAGA TGCCGGCAAT
GGCTCTGCCA TTTTCATTGC CAGTGGCAAC ATGACAAAAG CAAAATCACA GTTTGTTAAT
CAAGAAGTCG TTAATGGCAC CTGCGTTTGT TGCAGGTTAG CGGTGGATTA TAACCAGCAA
GGTAAGCTCG CTATATTATG GCGTCATATT TATGGGGATA ATATCAGAGA ATTTGCCATT
ACCACGCTAG GTGAGCAGAG TACGCCCTAT CAAGTAAGTC ATGATCACTG GAAAATAAAC
GGTTGCCCAC ACCAAGGAGG CGCTTTATCT ATAGCTCAAG ATAATCGCTA TCACATGGTT
TGGTACAACC AAGGTGATAA AGGCAAAGGT ATTTTCTATA GCTATTCTAA CGATGCAGGT
AAGTCATTAT CATTACCTTT AGCGGTTGGG GAACAAGCAG CACAAGCGGC TCATCCACAT
ATGAGTGAAA GAAAGGGTGT TATTGATATT GTTTGGACCC AATTCACAGG AACTGAACAT
CAGTTATGGC ATCAACAATC TACCGATAAA GGCGTGACGT TTGGAATTGC TAGGGTGCTA
GCAACATCGA CTAAGGGTTC TGATAGACCT TTTATAGTCC AAGGACAAAA CAATAGTTTT
GTGTCTTGGC ATCGCTTTCA ACAAGGTCAT TGGTTGAACC AATTATGA
|
|---|
| Protein sequence | MRILMKNINN RLKLLILVTF ILSTGISQQV LAEPMDHSQH QGQKSVKQAK TICQKIAVTC
GKTVTSAFAP NGDFWRIWSQ QDNIYYQISP DNGQNFGIAK AVGIAKEKIS ARNENRPKIA
FDSKQGVYLS WASPREKKYT ADIRYSYSSD YGKTFSTPIT VNDDGLLTGH SFNEMVVNDE
GDVSIVWLDG RLKQRKDAGN GSAIFIASGN MTKAKSQFVN QEVVNGTCVC CRLAVDYNQQ
GKLAILWRHI YGDNIREFAI TTLGEQSTPY QVSHDHWKIN GCPHQGGALS IAQDNRYHMV
WYNQGDKGKG IFYSYSNDAG KSLSLPLAVG EQAAQAAHPH MSERKGVIDI VWTQFTGTEH
QLWHQQSTDK GVTFGIARVL ATSTKGSDRP FIVQGQNNSF VSWHRFQQGH WLNQL
|
|---|
| |