Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0486 |
Symbol | |
ID | 3519790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 491392 |
End bp | 492639 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637282951 |
Product | BNR repeat-containing protein |
Protein accession | YP_267244 |
Protein GI | 71279335 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.964495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATTC TTATGAAAAA TATTAACAAC CGACTAAAGC TATTAATTTT GGTGACCTTT ATCTTAAGCA CGGGCATTAG TCAGCAAGTG TTGGCTGAGC CCATGGATCA TAGTCAGCAT CAAGGTCAAA AATCAGTAAA GCAAGCGAAG ACAATTTGTC AAAAAATTGC AGTGACATGT GGAAAAACGG TTACCAGTGC TTTTGCACCT AACGGTGACT TTTGGCGAAT TTGGAGTCAA CAAGATAACA TTTATTATCA AATTTCACCT GATAACGGTC AAAATTTTGG TATAGCTAAA GCTGTTGGTA TAGCCAAAGA AAAGATATCA GCACGAAATG AGAATAGACC CAAAATAGCG TTTGATTCAA AGCAAGGTGT CTATTTGTCG TGGGCTTCAC CGCGTGAGAA AAAATACACC GCAGATATTC GATATAGTTA TTCCAGTGAT TACGGTAAAA CTTTTTCCAC GCCTATTACC GTAAACGATG ATGGTTTGCT CACGGGACAT AGCTTTAATG AAATGGTAGT CAACGACGAA GGCGACGTTA GCATCGTCTG GTTAGATGGT CGTTTAAAGC AAAGGAAAGA TGCCGGCAAT GGCTCTGCCA TTTTCATTGC CAGTGGCAAC ATGACAAAAG CAAAATCACA GTTTGTTAAT CAAGAAGTCG TTAATGGCAC CTGCGTTTGT TGCAGGTTAG CGGTGGATTA TAACCAGCAA GGTAAGCTCG CTATATTATG GCGTCATATT TATGGGGATA ATATCAGAGA ATTTGCCATT ACCACGCTAG GTGAGCAGAG TACGCCCTAT CAAGTAAGTC ATGATCACTG GAAAATAAAC GGTTGCCCAC ACCAAGGAGG CGCTTTATCT ATAGCTCAAG ATAATCGCTA TCACATGGTT TGGTACAACC AAGGTGATAA AGGCAAAGGT ATTTTCTATA GCTATTCTAA CGATGCAGGT AAGTCATTAT CATTACCTTT AGCGGTTGGG GAACAAGCAG CACAAGCGGC TCATCCACAT ATGAGTGAAA GAAAGGGTGT TATTGATATT GTTTGGACCC AATTCACAGG AACTGAACAT CAGTTATGGC ATCAACAATC TACCGATAAA GGCGTGACGT TTGGAATTGC TAGGGTGCTA GCAACATCGA CTAAGGGTTC TGATAGACCT TTTATAGTCC AAGGACAAAA CAATAGTTTT GTGTCTTGGC ATCGCTTTCA ACAAGGTCAT TGGTTGAACC AATTATGA
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Protein sequence | MRILMKNINN RLKLLILVTF ILSTGISQQV LAEPMDHSQH QGQKSVKQAK TICQKIAVTC GKTVTSAFAP NGDFWRIWSQ QDNIYYQISP DNGQNFGIAK AVGIAKEKIS ARNENRPKIA FDSKQGVYLS WASPREKKYT ADIRYSYSSD YGKTFSTPIT VNDDGLLTGH SFNEMVVNDE GDVSIVWLDG RLKQRKDAGN GSAIFIASGN MTKAKSQFVN QEVVNGTCVC CRLAVDYNQQ GKLAILWRHI YGDNIREFAI TTLGEQSTPY QVSHDHWKIN GCPHQGGALS IAQDNRYHMV WYNQGDKGKG IFYSYSNDAG KSLSLPLAVG EQAAQAAHPH MSERKGVIDI VWTQFTGTEH QLWHQQSTDK GVTFGIARVL ATSTKGSDRP FIVQGQNNSF VSWHRFQQGH WLNQL
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