| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0467 |
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| Symbol | pilM |
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| ID | 3522504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 469834 |
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| End bp | 470913 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637282932 |
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| Product | type IV pilus biogenesis protein PilM |
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| Protein accession | YP_267225 |
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| Protein GI | 71282032 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.183586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTAGACA AACTATGGAA AAAGAAAAAC TCAATGATGG TTGGAATCGA TATTGGTTCT
CATTCAGCGA AGGCTGTACT ATTGGGTCAG GGAAATGAAG GCTTTATAAT TGAAGATTTT
GCCATTGAGC CAATGCCTCG AGGTTCGGTT GTTGATCGTG AGATTCAAGA TATCGAAGCT
GTTGGTGCCG TTATAGCGAA ACTGAGGAAA AAGATTTCTG CAAAAGCCAC TGATGCAGCA
GCTGCAGTAT CAGGGCAAAC TGTTATTACT AAATTGATTT ATATGGATGT AGCTTTGACA
GAGGATGAAC TGGCAAGCCA AATTGAAATT GAAGCTGATA GCCTCATTCC ATTTCCCCTT
GATGAAGTTA GTTTAGACTT TGAAACTCTT GATGTTAATG AATCGGACCC TAGCAAAGTA
AATGTGTTGC TTAGTGCGGC TCGAACTGAA TCAATTGAAG CGCGTGTTGC AGCATTAGAT
GCCGGAGACT TCCATGCCAA GGTCATTGAT GTTGAATCTT ATGCCGTTGG CCGAGCTTAT
GATTTATGTT TAACACAACT TCCAGATGAC GCAAAAGATA AAGTTGTGGC AATTGTTGAT
ATAGGATCAA CGGTCACACT GTTCTCAGCA ACTGATGCGG GTAAACATAT TTATAGTCGA
GATCAAATGT TTGGAGGAGA ACAGTACACT CGTTCTATTG TCTCTTATTA CAATAAATCC
TTTGAGCAGG CTGAAGAAGC AAAAACCTCT AACGACTTAC CACCAAACTA TACTTTTGAA
GTCCTAGCAC CTTTTCATAC GGTGTTAATG CAGCAAATAC GTCGTGCAAT TCAGATGTTT
TTAACGACCA GTGGTCAAAA CAAAGTCGAT TACTTATTGA TTTCTGGCGG TACAGCGGCA
TTAGAAGGCA TTGAAAGCTT GCTTACAGAA GAATTAGGAA TACATACCGT TATTGCTAAT
CCATTCAATG ATATGTCATG TGGTGAATCT ATTGAGCAAG CTGAGCTTGC TAATGTTGCA
CCTCAATTAA TGGTGGCAAC AGGTTTAGCC TTAAGGAGTT TTACCCCATG GCACATATAA
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| Protein sequence | MLDKLWKKKN SMMVGIDIGS HSAKAVLLGQ GNEGFIIEDF AIEPMPRGSV VDREIQDIEA
VGAVIAKLRK KISAKATDAA AAVSGQTVIT KLIYMDVALT EDELASQIEI EADSLIPFPL
DEVSLDFETL DVNESDPSKV NVLLSAARTE SIEARVAALD AGDFHAKVID VESYAVGRAY
DLCLTQLPDD AKDKVVAIVD IGSTVTLFSA TDAGKHIYSR DQMFGGEQYT RSIVSYYNKS
FEQAEEAKTS NDLPPNYTFE VLAPFHTVLM QQIRRAIQMF LTTSGQNKVD YLLISGGTAA
LEGIESLLTE ELGIHTVIAN PFNDMSCGES IEQAELANVA PQLMVATGLA LRSFTPWHI
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