| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0390 |
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| Symbol | |
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| ID | 3520389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 392817 |
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| End bp | 394214 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637282855 |
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| Product | hypothetical protein |
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| Protein accession | YP_267148 |
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| Protein GI | 71279926 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAAGACC AAGCTAAACT AGCATTAGAA AACACGAAAT TCACCCCTTT TTGGTTAGAC
AATCCAGATC GCCCAGCTGC TGAAGCTCAT CTCACAACAG CGATTACCAC CGATTTATTG
ATTGTTGGTA GTGGTTTTAC TGGTTTGTGG ACGGCGGTAC AAGCCAAAGA ACAAAACCCT
GATCGAGCAA TTGTTGTGAT AGAAGCCAAT ACTGCTGCAA TTGGCGCATC AGGTCGTCCA
GGTGCTATTT TATCTACTTC GCTAATGCAC GGTATGGAAA ACTCTAACCG TTTATTCAAA
AATGACATGG AAGAGTTGGA ACGTCTCGGT AAAGAGAATA TGGATCAGTT CCGTGACACC
ATTGAAAAAT ACAATATTGA TTGTGATATT GAATGGACAG GTGAATTAAC GGTTGCTGTC
GGGAAACATG GCATTGACGA TATTGAAGGT GAACATGAGC TGTACGTTAA ATTTGGTCAC
GATGCCCATT TATTAGATAA AAAACAAATT CAAGCAGAGA TTAACTCTCC ATTTTTTGAG
GGAGGTCTTT GGTCTAAAAA GCGCTCAGGA ACTATTCATC CTGCAAAAAT GGCCTGGGGC
CTAAAACGCG TTGCAAAAGA TCTCGGCGTA GTGTTTTATG AAAATACACC TATGCTGACA
AGTAAAACGC GAGGACAACA AGTTTTTATT AATACGCCTG AAGGCAGTAT TACAGCGAAT
AAAGTTATTT TAGCGACCAA CGCATTCACT AAACATAAAA AGAAAATCAG TACACGTGTA
GCGGCCATTC GTGATCGTAT TGTGATGACT GAGCCGCTAA CTGAAGAGCA GCTTGCCGAG
CTAGGTTGGA AAAATAGACA AGGTATTTAC GATACTCGAA CGCAGTTAAA CTACATGCGC
TTAACAAAGG ATAATCGTGT CTTATTTGGT GGCCGTTTAG GTTACTTTTT TGATAACGAT
ACCGATCCTG AACATGATAA AACCCCTGAG CCATTTATTA AACTGGTGGG AATGTTATAC
AAAACGCTAC CCGCATTAAA AGATATTAAA ATATCGCATG CGTGGAGTGG GCCTATTGCT
TTGACAACCA GAATGGCGGT GCATTATCAG TATTATCACG GTGGAAAAAT GATCTATGCG
GGCGGCTATT CTGGGTTTGG TGTTACCGCA AGTCGCTTTG CCTCTCGCGT TGCTTTGGCG
ATTGTTGACG ATGTTGATAT TCCCGAGCGT AATTTAGAAT TTGCCAAAAC AGTACCTGCT
TGGATCCCAC CTGAGCCATT TCGTTGGATT GGTGCCAAGA TCACTATGTA TGCATTAGAT
ACCTGTGATG CAAAAGGTGG CTGGAGAATA CCTTGGTTAA CCCTTGTTGA TAAAATGGGC
TTCCCTTTAA AACCTTAA
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| Protein sequence | MQDQAKLALE NTKFTPFWLD NPDRPAAEAH LTTAITTDLL IVGSGFTGLW TAVQAKEQNP
DRAIVVIEAN TAAIGASGRP GAILSTSLMH GMENSNRLFK NDMEELERLG KENMDQFRDT
IEKYNIDCDI EWTGELTVAV GKHGIDDIEG EHELYVKFGH DAHLLDKKQI QAEINSPFFE
GGLWSKKRSG TIHPAKMAWG LKRVAKDLGV VFYENTPMLT SKTRGQQVFI NTPEGSITAN
KVILATNAFT KHKKKISTRV AAIRDRIVMT EPLTEEQLAE LGWKNRQGIY DTRTQLNYMR
LTKDNRVLFG GRLGYFFDND TDPEHDKTPE PFIKLVGMLY KTLPALKDIK ISHAWSGPIA
LTTRMAVHYQ YYHGGKMIYA GGYSGFGVTA SRFASRVALA IVDDVDIPER NLEFAKTVPA
WIPPEPFRWI GAKITMYALD TCDAKGGWRI PWLTLVDKMG FPLKP
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