Gene CPS_0356 details

Gene Information

• Locus tag: CPS_0356
• ID: 3520853
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 366109
• End bp: 366768
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637282821
• Product: hypothetical protein
• Protein accession: YP_267114
• Protein GI: 71280387
• TIGRFAM ID: [TIGR02595] PEP-CTERM putative exosortase interaction domain

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTTA AATTTTTAAA AGGTACTTTT GCAAGTCTTG CGTTAGCTTG TTGTAGTTTA 
GCCAATGCCG GACTTATTAT TGGTGCTGAT TCCGTAACCG CGCCTAATTC AAATGGTTCT 
GCTTTGGCAG TCAATATAAT CAACCAAAAT GGTTTAAGTC AGAACTATAC TTCAGGTGTA 
ACTGATTTCG ATACGTTTCT ATCCACAGCT ACACATAATA ATTCTTGCGG GAGTAACTGC 
TGGGCGAATG TTCCCAATGT TATTTTCCCT ATCAATCTTG ATTTTTCTTT AGGTGGTTTA 
TTTGAATTAG AAAGTATAGG AATTTGGAAC TATCATGGTG CACTGGGACT TAATGAATTC 
GAGTTATTTG CAGCAGACAA CTCCAGTTTT TTAGGTTCAA CCTCACTTGG GACATTTAAC 
GTAGGTATGG AGTCTAGTTC CGCTGTAGCT TCGGGGCAAA GCTTTTCTTT TGCTTCTACC 
AACGCTTCAT TTATTAGAAT GAAACTTAAT TCAAATTACG GTAGTACTGG GCAAGTCGCT 
ATTGGTGAAG TGGTATTCGA GAAAGCTTCA TCTACTGATA TTCCAGAGCC TTCTACACTT 
GCAATTTTTG CATTAGGAAT GATTGGTTTA GCATCACGTA GATTTAAGAA ACAATCTTAA 

 

Protein sequence

MKFKFLKGTF ASLALACCSL ANAGLIIGAD SVTAPNSNGS ALAVNIINQN GLSQNYTSGV 
TDFDTFLSTA THNNSCGSNC WANVPNVIFP INLDFSLGGL FELESIGIWN YHGALGLNEF 
ELFAADNSSF LGSTSLGTFN VGMESSSAVA SGQSFSFAST NASFIRMKLN SNYGSTGQVA 
IGEVVFEKAS STDIPEPSTL AIFALGMIGL ASRRFKKQS