| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0238 |
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| Symbol | |
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| ID | 3519961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 241810 |
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| End bp | 244641 |
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| Gene Length | 2832 bp |
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| Protein Length | 943 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637282704 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_267005 |
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| Protein GI | 71279502 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAA AAAATACATT ATCGACAGCA ATTATTGCAA TTTTAGCGTC AACAGCTTCA
GTGCAAGCGC ATGCTGAAGA CAGTAAAACA GCTGAAAAAG ACGTTGAAAA AATCACCGTT
ACAGGCATTA GAGGCGCTCT TGGTCGCGCT TTAGACACAA AACGTGAAGC TAGTGGCGTA
GTTGATTCTA TTTCTGCTGA GGATATTGGC AAGTTTCCGG ACACTAACCT TGCAGAATCA
TTACAACGTA TTACTGGCGT CTCGATAGAT AGATCGGGTG GTGAAGGTCA AAAAATCACC
GTGCGTGGTT TTGGTCCACA ATTTAATACA GTACTTGTTA ATGGTCGACA ACAAGCCTCT
GAAGATCCAG GTCGTGATTT TAGTTTTGAT ACGCTTGCTG CCGAAATGGT AAAAACCCTA
GATGTGCATA AAACATCATC AGCGACGGTA CAGTCAGGTG GTATTGGCGC CACGGTTAAT
ATTGAAACGG CGAAACCTTT TGCTATTAAT GGTTTTAAAT TAGCGGGTAG TGTCAAAGCA
ACTTATGATG GTAATAGTGA AGAGACCTCC CCACAAGCGT CACTTTTGAT AAGTGATACC
TTTAATGATG ATACCTTTGG TGCTTTATTT GCAATCTCGT ATTTAGAGCG TGAAACGAAA
TTAAATCGTG CTCAAAGTGC TGGTTGGCGT GAAAATTCTT CTTTCGGCAA AGGCGCTCCT
GTAACAGAGT CCGGTGACGT ATATACCGGT AATATATTTA TTCCGCAAAA CTTTGATTCA
TTGGTTACCA CAGAAAAACG TGAACGTACC AATGCAAACT TAGTCTTGCA GTATGCACCT
TCAGATAACC TTGTCATTAC CGCAGATGCA TTATATTCAG ACTTTGATGT CAAATCTGAT
ACAACATCTT ATGGTCATTG GTTTACTTCT GATAATGTTG AAAATGCTGT TGTTGATGCC
AATGGTACTA TCACTTCAAT GTATCAAGAA ACAGGTTTAG CAACTGACTT TCACGCTAAA
AAAGCGGATC GTTTAACTGA TTCACTTTCT ATTGGTTTGA ACTTTGATTG GGATGTTAAT
GATAACTTAA ATATGAAGTT TGATTTAAGT AACTCAACAG CTAAAAGAGA ACCAAATAAT
GGTCGTGGTG GTAGCTTAGC GTTATTAGGT TATGCCAACC GAGTTCAATG GAATGTTGAT
GGTAATATTT TGCCTTATTA CTCTGACTTT GCAACCCCAG ACCCTTCAAT TTACAGTGGT
CAGCAAGAAG GAGATGGTGT TAATCAAGAT CCAAATAGTC CTGATTATGT CTCACCTACG
GGGGTTTCTG ATTATTTAGA TCCCGCCAAC AGTCGTGCCC ATGTAATGAT TCGAGACAGT
AAAGAAATTG AGGATGTTGT TACTCAAGTA AAATGGGATA GTCTTTGGTT ATCGGATGGA
GATACTGGTT TCTCTGCTGC CCGTTTTGGT GCTATGTATT CTACTGAAAC CAAAACAGTA
AATTCTTGGG ATAATACCAC TAGCGGAATT CATTGTACCT ACTGTAATTA CCAAGACTTC
CCTGATGTTA GCGCCTTCCC TCAAGAAGTA TTTGATGCAG GAAGTGACTT TTTAAGTGAT
GTTAGTGGCA GCGGTCGTAC ACCTTCACAA TGGTTAAAAT TTGATGGTGA AGCATTATTC
GATTTCTTAG GTGCAGTTGA AGGCGTTGAT TTTAACGCTG TAAAAACTAA TAACTCTTTT
GAAGTTAAAG AAGAAACGAC TGCTTTTTAT CTAGAGCTGG ATTTTGAAGG CGAGATAGCA
GGTATGCCTC TCTATACTAC TGGTGGCTTC CGTTACGAAA GCACTGATGT CACTGTAGGC
GCAACACAAG CTAATGTTCA GCGATTAGAT ATTCTTGATG CAACTGAAAT GCTAGCGGTT
TATGGCCCAG CTTCAGACTT TGATGAAAGT AGCAGTTATG CTCAAATTTT ACCTAATTTT
AGTACTAAAT TAGAAATCAC AGATGAACTC GTTGCTCGTG TTGCCGCATC AAGAAGTATT
TCACGACCTA CTTTAAGTAG CTTGCGTCCA ATAACGTCGT TAGATACTGT GCGCCAGGGT
AACTTACAGT CTTCCAGTGG TAATGCTGCA TTAGTACCTT TTAGCTCTGA TAACTTAGAC
TTGTCAATTG AATGGTATTA CGCGGATGCT AGTTATGTTT CAGCGGGTTA TTTCAGGAAA
CATGTTGCTA ACTTTATAAC CAGTAGTAAA AATCCTAAAA CCTTTGTTAC CGCTGATAGT
AGTTTGTTAA CTGACCCTTC TACAGGAAGT GATGTCAGTG CACCAGATGC AGATGACCAA
GTTGCAGTCT TTACCAATAC CGCGCCAAGT AATGGTGAGT CAGCTGTCGT TGATGGTTGG
GAACTAGCGG CACAACATAC CTTTGATTCT GGTTTTGGCC TGCTCGCCAA TGCCACGCTT
GTTAATAGTG ATGCTGAATT AGATAATGCA GATATCACGC AAGTTTTTGC GTTAACAGGA
TTAAGTGATT CAACTAACCT TATCGCTTTC TATGAAAGTG GTGCATTTCA AGGTCGTATT
GCTTATAACT GGCGTGATAC CTTTTTGCAA AACCTTACGC AAGGTGGTGG TGATGGGGTA
ACTTATGTTG AAGCCTATTC TCAGTGGGAT GCAAGCGCGA GTTATGACCT CACGGATCAA
ATTACCGTTT TTGTTGAAGG CATTAACTTA ACGGAAGAAT ATACGCACAA TCGTGGTCGA
TTCTCTAATC AAATATTAGA GGTTGTTGAT AGCGGACGTC GTATTTCATT CGGTGTACGT
GGCTCTTTCT AG
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| Protein sequence | MFKKNTLSTA IIAILASTAS VQAHAEDSKT AEKDVEKITV TGIRGALGRA LDTKREASGV
VDSISAEDIG KFPDTNLAES LQRITGVSID RSGGEGQKIT VRGFGPQFNT VLVNGRQQAS
EDPGRDFSFD TLAAEMVKTL DVHKTSSATV QSGGIGATVN IETAKPFAIN GFKLAGSVKA
TYDGNSEETS PQASLLISDT FNDDTFGALF AISYLERETK LNRAQSAGWR ENSSFGKGAP
VTESGDVYTG NIFIPQNFDS LVTTEKRERT NANLVLQYAP SDNLVITADA LYSDFDVKSD
TTSYGHWFTS DNVENAVVDA NGTITSMYQE TGLATDFHAK KADRLTDSLS IGLNFDWDVN
DNLNMKFDLS NSTAKREPNN GRGGSLALLG YANRVQWNVD GNILPYYSDF ATPDPSIYSG
QQEGDGVNQD PNSPDYVSPT GVSDYLDPAN SRAHVMIRDS KEIEDVVTQV KWDSLWLSDG
DTGFSAARFG AMYSTETKTV NSWDNTTSGI HCTYCNYQDF PDVSAFPQEV FDAGSDFLSD
VSGSGRTPSQ WLKFDGEALF DFLGAVEGVD FNAVKTNNSF EVKEETTAFY LELDFEGEIA
GMPLYTTGGF RYESTDVTVG ATQANVQRLD ILDATEMLAV YGPASDFDES SSYAQILPNF
STKLEITDEL VARVAASRSI SRPTLSSLRP ITSLDTVRQG NLQSSSGNAA LVPFSSDNLD
LSIEWYYADA SYVSAGYFRK HVANFITSSK NPKTFVTADS SLLTDPSTGS DVSAPDADDQ
VAVFTNTAPS NGESAVVDGW ELAAQHTFDS GFGLLANATL VNSDAELDNA DITQVFALTG
LSDSTNLIAF YESGAFQGRI AYNWRDTFLQ NLTQGGGDGV TYVEAYSQWD ASASYDLTDQ
ITVFVEGINL TEEYTHNRGR FSNQILEVVD SGRRISFGVR GSF
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