| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0185 |
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| Symbol | |
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| ID | 3519400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 195714 |
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| End bp | 199034 |
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| Gene Length | 3321 bp |
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| Protein Length | 1106 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637282652 |
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| Product | site-specific recombinase phage integrase family protein |
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| Protein accession | YP_266953 |
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| Protein GI | 71279081 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACC ATCGGGATAA ATTCTACATA ACTTGGGAAG AAGCCTCTAA AGCAACCATC
GTTTTGGATT GTGCTTATAA AAAAGACTAC CTTGAAAAGT ATAAAAGCGA TCCCAAATTA
CCATCCAACC CTCAAAGAAG TTATCCTGAG TTCAAAGAGA AAGGGGGATG GTCTGCTTAT
TTAAGTACAG GTGATAAATT CTACAGAACG TGGGCAGAAG CCTCTAAAGC AGCCATTGCT
TTGGGTTTCA ATCGCTCCGG TCATTACTTC AACGGATATA AAAAAGACCC TAAATTGCAC
TCAGACCCAT CCGTTCACTA CCCCGACTTC TATAAAAAAG GTGGTTGGGC TGGCTTTTTG
GGGAATCCAG TGCCTACTCC AAAACACGAA ACTTGGGAAG AAGCTTCTGC TGCGGCTATA
AAGTTAGGCA TAACAAACAC TCATGAGTAC AAAGCGTTAT ATAAAAAAGA CCCCCTACTG
CCATCAGACC CTCAACGGAG CTATCAAGAT GTATGGGATA AAAACGGGGG GTGGTCAGGC
TTCTTTGGTA GGCAATTGGG CTCTATTGAC ACAAGTAAGA TGCTCAAGGT GCTAGAAATA
ATCGATATAG AAGGCTATGC GGAAATAGAC CATGTGAAGC TGCCGAAAGA CCCGCTAAAA
ACATACGATT TGGAAACGTT TGAAGAACTA TTGACGCTTA AAGTGTATGA CTTGGCGCAA
GTCAAAGCCT ACTGCGAACG AAAAGGGTTC CAAGAGGTGG CTGAGTATAG AAAAGCTTCC
AGTGACCAGC AGCACTTAAA CAACGCCACA CCTATAGGTA TCAAAGGGTA TGTTTCGGGC
AAATCTATCA TCAGTAAACT TACTAACTTT GAGCGAGCAA CAAAAGAACA CCCCGACTAC
TCCCAGTGGT TTGACATGGC TATTAAATTT GCACTTTTGG GTAAAAACAT CCGAAAAAAG
AAGGTGATAC TCTTTAATTT TGTTATGGAA TACTTAGTCG ATTTGGAGCA ACCGACACAG
CCAGCAGCTT TCTTCGCAAG GAAGCATGCA CCGCCACTTT TAACCAGTTT TATGGAAAAG
CAGCCTAAGT TTGCACAATC TATAACTGGA ATCAATATAT TGAAGGACTT CATTGAAGAC
ACATTTCATA GATGTTGCCA AGATGAAGAC GATGATGGGA TATCCGTGGT ATTGCCAGGG
TTTATTAACA AATGGTCTCG AATAATATCA ACTGTTGAGC CAGTTAAGAT AGACAGGCCG
GATAAATCCG AAAAGTGGCC GTTAGCGATG AATTATATAG ATCGTGCGGC TAAATTTCTC
GTCCCTGACA GCGCCAAAAC ATTCCAAGAT GTGATGCAAC TGGAATGTGA CTGGTTCATC
GTCGATGAAT CCATCATCGA TAAGGATGAT CTCAATTGCG TTTGGCGAAC CAAGATGATC
AACTCCGGAT ATGGCAAGAA AATGAGATAT CAAATGTGGT CACCCGTTAG AACTCTTGCG
TTGTTTGTAC TCTTTAGTAT GCCGCTCAGA GGCCAGCAGA TTTGTTGGCT CGATTCTGGC
GAAGCAGATA CGGAAATTCC GATTATAAAC GCACAAGACG AGGTCGTATG GGTTAAAAAC
GACCATCACC TTATCAACGA CGTCAATAAA CGCACTGAAA GACAGGGTTT CTTGAGGCGC
TTTAAGGATG CGAAGAAGAC AACCGTAACC AACGACAAGG GTATCGAAGA AACTCGGCGT
GAGGATATTA TCGGCTCTTA CATCACAACC AATAAAACCA GTAAGGATGG AAAAGGCTAT
GAAGTGGCAT ATATGCCTAT CCACCTCATT AAATGGATGA TTAGATTGCG AGAGTGGCAA
TCAAAATATA ACCCCATCGA TAAATTAACC TCTTGGGAAT CGGTAGCACT AATAAACGAA
AAGAATAATA AAATACTGAA GGCAATGAAA TCACAGGCGT TTTTATTCAG AGACCCAGAC
ACATTGCACG CAGAAGATAA ATGCCAACCT ATTGGTCGAG ATAAAGCTAT GTCCAATACT
TTTTCCTGGG TGTTATACCA AATACAGGAT AAAGATATTC CGTTGGCATA TCTTCCAGAA
GGAAAAAGTG ATTGTCAAAT GAATAATTAC AAGAGTGATT TCACGCCACA TGGCATGCGT
GTTTCGTTTA TCAGCGCCTA TATTCTTGAT GCAAAACTGC CCATCTCAAT TGTTGCCGCA
CTTGTTGGGC ACGCTTCAAT AGTAATGACG ATTTATTACA CAGTGACCAC GAATCAAGAT
TATTATGAGA TGCTCAGTGC TGGACACCAA GCCGCACTAA CGGCAGCTCC TGCAAGGATT
GCTGGCCTGA TCAAGAATAA ACAACTCAAG CTTTCTAGTA GTGACTTTTT CGATTCAAAC
GGACAGCCCG TTAAACCAAT GTATGATAAA GCGCCTTACG CCGCACTCGG GTTTAAAGAC
TTCGGGATTT GCCCTGTTGC GTGCTCAAAG TGTCATGAGG GTGGGGATGA AGTCAAACCA
GGTTTGAATG TCTTTGGCCC TGTACGCTCT GGCTACCTTG GCCCCTCAAA TTGCTTTGTC
TGTCGGTTTT TTATTACTGG CCCTGGTTAT ATTGGTGGGT TGAAGACTAT GCTCGCAGAA
GTGGGTTTAG AAGCCAAAGA GTCTGGTAAG CGTATGGAAA AATTTCGTGA AGAGAGAGAA
GAGCTTGAAT ACTTGCAGTA TCGCTCAAGA AAAGATGATT TACCCTTTGA ACACGAGGCT
AAGTTAAATA ATATTTTAAC GCTACATCAG CAGGAACAGG AAAAGTTTGA TGCTTTATCT
TATGATGCTT CAACAATTGC GATCATGGGC TATAGATGCA GTAAACTACT TCAAAATCAG
TCAGAAAACG CTGAGAATAA AGGCCACCAA TTAATCCTAC AAGAAGGCAA CCCTATGCTT
GGTGTCAAGA TAGATGAAGT TTCTGAGTTC GCTCACATGA CAGAAATTTG TCAGAACGCT
GAAATTTATG CTTGTGCCAA CCCGAGTCGA GCGTTGCCTA AGCGCACGAA AATGCTTGAT
ATGTTCGCAT TGAACAATGG ATTTTCACCT AAAATTTTCC TGTTATCAGA TGAAGATCAA
CTTAAGGTGG GCAACCAAAT AACCAGCATC ATGTTGAATC GGCTCAACGG CTCATGGGAT
GATGCAGAAA GGTTGATGGA TGGCACCGTA ACGCTGAAGG ATTTAGGACT TTCCGGAAAG
GAAATAATGG AGCCAGTTAC CTTAGCTTTG AACCATTGGA CTCCCGAAGC ACAGGTTCGA
ATTGAGGTGA TTAATGTATA A
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| Protein sequence | MSNHRDKFYI TWEEASKATI VLDCAYKKDY LEKYKSDPKL PSNPQRSYPE FKEKGGWSAY
LSTGDKFYRT WAEASKAAIA LGFNRSGHYF NGYKKDPKLH SDPSVHYPDF YKKGGWAGFL
GNPVPTPKHE TWEEASAAAI KLGITNTHEY KALYKKDPLL PSDPQRSYQD VWDKNGGWSG
FFGRQLGSID TSKMLKVLEI IDIEGYAEID HVKLPKDPLK TYDLETFEEL LTLKVYDLAQ
VKAYCERKGF QEVAEYRKAS SDQQHLNNAT PIGIKGYVSG KSIISKLTNF ERATKEHPDY
SQWFDMAIKF ALLGKNIRKK KVILFNFVME YLVDLEQPTQ PAAFFARKHA PPLLTSFMEK
QPKFAQSITG INILKDFIED TFHRCCQDED DDGISVVLPG FINKWSRIIS TVEPVKIDRP
DKSEKWPLAM NYIDRAAKFL VPDSAKTFQD VMQLECDWFI VDESIIDKDD LNCVWRTKMI
NSGYGKKMRY QMWSPVRTLA LFVLFSMPLR GQQICWLDSG EADTEIPIIN AQDEVVWVKN
DHHLINDVNK RTERQGFLRR FKDAKKTTVT NDKGIEETRR EDIIGSYITT NKTSKDGKGY
EVAYMPIHLI KWMIRLREWQ SKYNPIDKLT SWESVALINE KNNKILKAMK SQAFLFRDPD
TLHAEDKCQP IGRDKAMSNT FSWVLYQIQD KDIPLAYLPE GKSDCQMNNY KSDFTPHGMR
VSFISAYILD AKLPISIVAA LVGHASIVMT IYYTVTTNQD YYEMLSAGHQ AALTAAPARI
AGLIKNKQLK LSSSDFFDSN GQPVKPMYDK APYAALGFKD FGICPVACSK CHEGGDEVKP
GLNVFGPVRS GYLGPSNCFV CRFFITGPGY IGGLKTMLAE VGLEAKESGK RMEKFREERE
ELEYLQYRSR KDDLPFEHEA KLNNILTLHQ QEQEKFDALS YDASTIAIMG YRCSKLLQNQ
SENAENKGHQ LILQEGNPML GVKIDEVSEF AHMTEICQNA EIYACANPSR ALPKRTKMLD
MFALNNGFSP KIFLLSDEDQ LKVGNQITSI MLNRLNGSWD DAERLMDGTV TLKDLGLSGK
EIMEPVTLAL NHWTPEAQVR IEVINV
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