| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0165 |
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| Symbol | tatC1 |
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| ID | 3523265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 175473 |
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| End bp | 176240 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637282632 |
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| Product | Sec-independent periplasmic protein translocation protein TatC |
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| Protein accession | YP_266933 |
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| Protein GI | 71278984 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACTC CCCCAACACC AGTTGCCAGC CTTTTTGATC ATCTTTTAGA ACTACGTAAT
CGTTTATTGC GATCAATTCT TGGAGTATTA ATCGTTTTTT GTTGCTTAGT CTACTTTGCA
CAAGATATAT ATCAATACGT GGCTCAGCCA TTATTAGCTA CCATGCCAGA AGGGTCACAA
ATGATAGCGA CCGATGTCGC TTCACCATTT TTTGCACCTT TTAAATTAAC TTTGGTTTTA
TCCCTATTTA TTGCGATGCC ATTTGTTTTA TATCAAGTGT GGTCATTTGT TGCGCCTGGT
TTGTACAGTA ATGAAAAGCG CATGATTGCC CCGTTAATGT TCGGTTCAAC GTTGCTGTTT
TATAGTGGTA TTGCCTTTGC CTATTTTCTT GTATTTCCGG TAGTATTTGC CTTTTTTACT
TCAGTAGCAC CAGAAGGCGT TGTTATTGCG ACTGATATCA GTAGTTATCT AGATTTCATC
TTAAAACTGT TTTTTGCTTT TGGTGCCGCA TTTGAAATTC CTATTGCCAT TATCTTAATG
TGTTGGACAG GTATGACGAC ACCTGATAGC TTAAGAGAAA AGCGACCTTA TGTTGTAGTA
GGTGCATTTG TCATTGGTAT GTTATTGACA CCACCTGATA TTATTTCACA AACTATGTTG
GCCGTGCCAA TGCTGATTTT ATTTGAAGTC GGTATTATTA TTGCTTCGTT TTATCATAAA
GAAGAAGATG AAGACGAATC GAATAATATA AAGGAAAATG ACAAATGA
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| Protein sequence | MSTPPTPVAS LFDHLLELRN RLLRSILGVL IVFCCLVYFA QDIYQYVAQP LLATMPEGSQ
MIATDVASPF FAPFKLTLVL SLFIAMPFVL YQVWSFVAPG LYSNEKRMIA PLMFGSTLLF
YSGIAFAYFL VFPVVFAFFT SVAPEGVVIA TDISSYLDFI LKLFFAFGAA FEIPIAIILM
CWTGMTTPDS LREKRPYVVV GAFVIGMLLT PPDIISQTML AVPMLILFEV GIIIASFYHK
EEDEDESNNI KENDK
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