Gene CPS_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0111 
Symbol 
ID3519122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp118108 
End bp118647 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content38% 
IMG OID637282578 
Producthypothetical protein 
Protein accessionYP_266879 
Protein GI71278281 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1331] Highly conserved protein containing a thioredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATTT TCACCACATT TGTTATCAGT TTAAGTCTAC TATTGAGTAG TATTGCCACG 
GCAAATACTT CTGCTCCTGT TATAACGCCA AACTTACCCG CTTACAGCAA AATATATGAT
GATCAACGTG ACCCCTTTAA GGATGCAGCC GCGGCACTTA CTTTAGCGCA AGAAACCAAT
CGCCAAGTAT TGATTGAAAT AGGCGGTAAC TGGTGTAGCT GGTGCCATAA AATGGATGCC
TTTCTTGCTA AAAACCCTGA TGTCTATGAA GCATTACATA GCCAATATGT TTTACTCAAA
ATAAGTGTCA GTGACAGTAA TGAAAATAAT GATTTTATGA AATCACTGCC GCCAGTACTG
GGTTACCCAC ATATGTATGT ATCAACGGCA CAAGGAAAAA TGATTTTATC TAAAGATACC
GCAGAGTTGT TGACTGGAAA TAACTATTCA AAATCACAAT GGTTAAGTTT TTTAAGTGAC
TGGTCTGTTA GTACAACCAA AGCGCAAGCA CAGTTAGCAA CAACAGCGTC TGTAGAATAA
 
Protein sequence
MRIFTTFVIS LSLLLSSIAT ANTSAPVITP NLPAYSKIYD DQRDPFKDAA AALTLAQETN 
RQVLIEIGGN WCSWCHKMDA FLAKNPDVYE ALHSQYVLLK ISVSDSNENN DFMKSLPPVL
GYPHMYVSTA QGKMILSKDT AELLTGNNYS KSQWLSFLSD WSVSTTKAQA QLATTASVE