Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0111 |
Symbol | |
ID | 3519122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 118108 |
End bp | 118647 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637282578 |
Product | hypothetical protein |
Protein accession | YP_266879 |
Protein GI | 71278281 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1331] Highly conserved protein containing a thioredoxin domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATTT TCACCACATT TGTTATCAGT TTAAGTCTAC TATTGAGTAG TATTGCCACG GCAAATACTT CTGCTCCTGT TATAACGCCA AACTTACCCG CTTACAGCAA AATATATGAT GATCAACGTG ACCCCTTTAA GGATGCAGCC GCGGCACTTA CTTTAGCGCA AGAAACCAAT CGCCAAGTAT TGATTGAAAT AGGCGGTAAC TGGTGTAGCT GGTGCCATAA AATGGATGCC TTTCTTGCTA AAAACCCTGA TGTCTATGAA GCATTACATA GCCAATATGT TTTACTCAAA ATAAGTGTCA GTGACAGTAA TGAAAATAAT GATTTTATGA AATCACTGCC GCCAGTACTG GGTTACCCAC ATATGTATGT ATCAACGGCA CAAGGAAAAA TGATTTTATC TAAAGATACC GCAGAGTTGT TGACTGGAAA TAACTATTCA AAATCACAAT GGTTAAGTTT TTTAAGTGAC TGGTCTGTTA GTACAACCAA AGCGCAAGCA CAGTTAGCAA CAACAGCGTC TGTAGAATAA
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Protein sequence | MRIFTTFVIS LSLLLSSIAT ANTSAPVITP NLPAYSKIYD DQRDPFKDAA AALTLAQETN RQVLIEIGGN WCSWCHKMDA FLAKNPDVYE ALHSQYVLLK ISVSDSNENN DFMKSLPPVL GYPHMYVSTA QGKMILSKDT AELLTGNNYS KSQWLSFLSD WSVSTTKAQA QLATTASVE
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