| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0081 |
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| Symbol | |
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| ID | 3523347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 84067 |
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| End bp | 85326 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637282548 |
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| Product | response regulator/GGDEF domain-containing protein |
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| Protein accession | YP_266849 |
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| Protein GI | 71278698 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAAA GATTATTAAT AGTAGAAGAC AGTAAACCTA TAGCGACTGT TATCAAACAG
ATAGCGCGTT CGTTAAAGTT TGAGGTGGTT ATTGCTACTG ATTTAGCGCA GGTAGAAAAC
ATCTTATCAA CAGATACTGA TTTTTTTGCA GCGACTATTG ATTATGCCTT ACCTGATACG
CTAGATGGTG AGGCGATAGC TTGTGTCTTA TCCCATGGTA TTCCTAGCAT CGTTATGACA
GGGAAAATGG ATGATGAAAC TCGCCAGAAA ATATTATCAC AGCCAGTTAT TGATTATATT
CCAAAAGAAA ACAGTCAAGC CTTCCTCTAT TTAAAGCGTG TTTTACACTG GCAACAAACC
AATAATAAAA ACACCATTTT GGTGGTCGAT GACTCATCTT CTGCGCGAAA CCATATTGTA
GAGTTATTAA AACGCCGTAA TTTTAATGTC ATTACCGCTA ATAATGGTGT GCAGGCTTTA
GAAAAACTTG CTCAGCATAA AAATATTAAA ATGGTCATCA CTGATTTAGA GATGCCGGCA
ATGGACGGTA TTGAGCTGAC CAATGAAATA CGCCGTGTCT ATACCCGTGA GCAATTAGCG
GTAATAGGTA TTTCAGGCGC GAGTAATGGT ATTCATTCAG CGCGCTTTAT AAAAAATGGC
GCCGATGACT TTTTACGTAA ACCTTTTTGC CCTGAAGAAT TCTATTGTCG TATTACTCAA
AATATCGAGA GTTTAAATAA CATTGCTAAA ATTCAGCATG CAGCTAACAC CGATTATTTA
ACCGACCTTG CTAATCGCCG CGCTTTTTTC CGTAGTGCTG AGTCTCGCAT CAAAGAATAT
ATCAATAAAA AAGTACCTTA TTGTTTAGCT ATGATAGATG TCGACTTTTT TAAGAAGGTA
AATGATACCT ATGGCCATGA TAGTGGTGAT CAGGTATTAA AAGTCATTGC ACTTTATATG
CGTAAACATT TTGGCGCCGG ACTTACCGCT CGTTTGGGCG GTGAAGAGTT TGCCGTACTG
TTACATGGCT TAGATGCTGA TTATTTACAT AATAAATTAG ATGACTTTAG ACGAGAAATT
GCGGTGTCTT CTATTCCCGC GGGCGATACG TCAATATCTA TTACGTTAAG TTTAGGGGTG
GTTTTTGATA GCGAAGATGA GCTCTCTAAG CAAATGAATG AAGCCGATAA TGCGTTATAC
GCAGCAAAAG AAAATGGTCG CAATCAGATC GTCGTCTTTG GTGCTGAACT AGACGATTAG
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| Protein sequence | MSQRLLIVED SKPIATVIKQ IARSLKFEVV IATDLAQVEN ILSTDTDFFA ATIDYALPDT
LDGEAIACVL SHGIPSIVMT GKMDDETRQK ILSQPVIDYI PKENSQAFLY LKRVLHWQQT
NNKNTILVVD DSSSARNHIV ELLKRRNFNV ITANNGVQAL EKLAQHKNIK MVITDLEMPA
MDGIELTNEI RRVYTREQLA VIGISGASNG IHSARFIKNG ADDFLRKPFC PEEFYCRITQ
NIESLNNIAK IQHAANTDYL TDLANRRAFF RSAESRIKEY INKKVPYCLA MIDVDFFKKV
NDTYGHDSGD QVLKVIALYM RKHFGAGLTA RLGGEEFAVL LHGLDADYLH NKLDDFRREI
AVSSIPAGDT SISITLSLGV VFDSEDELSK QMNEADNALY AAKENGRNQI VVFGAELDD
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