Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0068 |
Symbol | |
ID | 3520119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 68317 |
End bp | 71787 |
Gene Length | 3471 bp |
Protein Length | 1156 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637282535 |
Product | sensory box sensor histidine kinase/response regulator |
Protein accession | YP_266836 |
Protein GI | 71279659 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0591] Na+/proline symporter [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCCTA ATTGGCAATT AGTGCTGTTA AGTTTGGCTT ATATTGGCCT ATTATTTTTA ATTGCTTTTT TAGGTGACCG ATACCGACAC CAGTTGGCTA GAAAGGGACA GAGCATTATT TATGCACTGA CCTTGGGGGT TTACTGTACC TCTTGGAGTT TTTTAGGAAC AACAGGACAA GCATCGACCA GTTTACTGTC TCACTTACCT ATTTATTTAG GGCCCATTCT ATTATTCGTT TTTGCTTGGC CATTTATCCA ACGTATTATT CGCGTTAGTT TAAAACTTCA TTTAACCTCA ATTGCTGATC TATTGGCAGC TCGATTTGGT AAGTCTCACA ATCTCGCTAT CATGGTCACA ATTGTTGCGC TCGTTGGCAC CATGCCTTAT ATCGCGCTGC AGCTTAAAGC TATGGTGTAT TCATTTCAGC AACTTCAAAT AGACCAAAGC TTAAATAGCT GGCACATCGG TCTAGTTGTT AGTTTAGTTC TAGCTATGTT TACCGTTTTA TTTGGTATTA GACATATCGA TGTCACTGAG CGACACCCAG GTGTGATGCT GGCCATTGCC TTTGAATCTT TAGTGAAGTT AGCGGCCTTT TTAGCGGTAG GTATCTTCGT TTGTTTTGTC TTGTATGACT CGCCAGCAGA TATTTGGCAG CAGGCCAATG CTGATGAATT ATTAGAACAG CAATTAACCA TAGACAATGT AACGTCAATG TTTGCCATGT TGGTGATTGT TATGGCGGCT TTCTTGTCTT TGCCAAGGCA ATTCCAAGTC ATGGTTGTTG AGCTTAAGGA TCAAAGAGAT ACTTGGTTAA GTCGTCGAGT TTTCCCTATA TATATTTTAA TTTTTGCCTT TTTTGCTGTG CCGTTGGGGT TAGCTGGTCA AATGCTTCTT GGTAATACGG TGCCTTCTGA TACCTACGTA CTCTTTCTTC CTGACGTTAC CCAACAAACA TGGTTGACCT TATTTGCCTT TTTAGGTGCA GTCTCGGCAG CAAGTTCTAT GGTCATTATC TCTTCGATTG CTTTGAGTAC CATGTTGAGT AATGAAATTG TTTTCCCTCT GCTTTATCGT CGTCAAAAAG TAGCACAGAC TGACTATGAT AACTTTCGCA AGCGATTGTT AAATATTAGA AAATTATTGG CTTTGTTTGT TATTTTATTA GGTTATGGTG TTTTCATCAT GGCTTCACCA GATACACTCT CTTCATTAGG GGAAGTGGCC TTTGGCGCTT TCGCACAATT AACACCAGCC CTTATTGCTG CTTTTTATTG GCGTCGTGCT AGTTTAATGG GCGTTTATGC AGGGATTTTA GTGGGTTTTA TTTTGTGGCT TACTCTTAAC TTTTTACCTC AGTTTGGTCT ATATGCTTCG CCTTTTGCCG AAGGCTTTTT GCCTGTTAAA ACCACGGCGA CCTTATTTAG TTTAGGCGCT AACATTATTG TAATGTGGGC TTTGTCTCAA ATCAGCAGAC AAAGTGTACA AGAGCGAGTT CAAGCATCAT TGTTTTTAGA GTGGCAGTCA CCTAAGTTAT TAAAAGTAGA GAAAAAAAGA CAGCTTGATG TACAAGAATT AGAACTGTTA GCCTCGCGTT TCGTTGGTTT GGAAAAAGCA CAAGCTAACT TTAATTCCTT TTTATCATCG CATGATAAAA AGGAGTTGGG CAATGTCATT TATAATCAAC AATTGATCCA ACATACCGAA AATACCTTAG CTACGGTTAT GGGCTCATCT TCGGCACGAC TAGTGCTTTC TTCCGCATTA GATGGTCGTG ATATTGCCCT AGAAGAGCTG GCGGTACTTG TTGAAGATGC ATCTAGTCAA CAGCAAGAAT TTTCTCAACA TTTACTACAA AGTGCCATTG AGAATGCGAG TGAGGGCATT TCGATTGTTG ATGATGAGTT ACGCTTAGTG GCTTGGAATA AAAAATACTT AGACTTATTC GAATACCCCC CTGAATTAGT CTATATGGGC AGCCCAATAT CCGCCCTTAT TCGTCATAAC GTGAAACGAG GTTTGTGCGG CTCTGGTGAT ATAGAGTCAC AGGTAGAGCG TCGTTTAGAT TTTTTACGTA AAGGTAGCCC GCATAGCTCG GAGCGGCAAC AAGTGAGTGG CCAAACTATT CGCATTGAAG GTAATCCGCT TCCTGGTGGC GGTTTTGTCA TGCTATTTTC TGATATCACG GCATATCGAC AAGCAGAGCA AGTCCTCAAA GAAGCAAACC TTGATCTTGA AACCCGTGTT TATGAACGTA CGCTAACGTT AGCTAAAACG AATGAAGCGC TAGCGAAGGC ACATGAGAAA GCAGAACAAG CGCATTTGAA AAAGAGTCAA TACCTAAACG CTTGTAGCCA TGACTTAATG CAGCCGCTTG AAGCTGCGAG ATTATTTACT TCAGCATTGT CAGAACAAAA TAATTTAACG ACTGATCAGC AAAGGCAAGT CGAAAATATC GATCGCTCTC TCAAAGCGGC GAACGATTTA TTAGCTGATT TAGCAGAAAT TGCGCGATTA GAAAGTGGCA ACATCAAAGC TAATATTCAA GCATTCGCAC TGAATGAATT ATTTGAAGAT TTAGCGCAAG AATTTTCGGC CCTTGCGATC GAGAAGTCAG TAGAGTTTCG TTTGGCGGTG AGTAAAGTAT GGGTGAAGTC AGATAGGCAC TTATTAAGAC GTATCATTCA AAACCTTGTT GGTAATGCCT TTAGGTATGC AAGTCCAGGC AAAGTATTAT TGGGTGCCCG AGTCTTTAAT AATCAAGTAA TCATACAAAT TTTAGATAAT GGGCCGGGTA TTCCAGTTGA GAAGCAGGTC CTGGTGTTCG AGCAATTTAC CCAACTTAAT ACCCCAAATA ATCATGCGGG CAGAGGATTA GGTTTAGGGC TTAACATCAC ACAAAGTTTG GCGCAGTTAT TGGGACACAC GTTAAGCTTA CAATCAAAAA CTATGCAAGG CTGTAAATTT TCTGTGCAAG TAGAACAAGC TGAGCCACTA GTACAAAGTC GTATTGTTAA TAACCCAAGC TTTATCGTTG CTTTAAAAGA CATTACTGTA TTATGTATTG ATAATGATCC AGATGTACTC AGTGGCATGG TTGAGCTACT TTCAGCATGG CAATGTAATA TCCTCGCAGC AGATTCTAGA GAAACAGCCT TAGAAGAGTT TGCTAATCAC AGTAATGAGA TTGATATATT ACTGGTAGAT TATCAATTGG GTTATCAAAC TGATGACCCA CAAGGCAAAC AAGTTGATGG CTTAACCTTA ATTAGTGATT TACGTAGCCA ATGTCATCAT TCGTTACCCG CAATATTAAT CACGGCGACA ACGGAGCCTG GGATTGAAGA TAAGGCTAGA AGTTTAGATG TGGGATATAT GCGTAAATTA GTGAAACCAG CAGCGTTAAG GGCGATGATG AGTGCCATGC TTGCTAAGAA ACTACAAGCA GATTACGTCG GTTATAGTTA G
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Protein sequence | MFPNWQLVLL SLAYIGLLFL IAFLGDRYRH QLARKGQSII YALTLGVYCT SWSFLGTTGQ ASTSLLSHLP IYLGPILLFV FAWPFIQRII RVSLKLHLTS IADLLAARFG KSHNLAIMVT IVALVGTMPY IALQLKAMVY SFQQLQIDQS LNSWHIGLVV SLVLAMFTVL FGIRHIDVTE RHPGVMLAIA FESLVKLAAF LAVGIFVCFV LYDSPADIWQ QANADELLEQ QLTIDNVTSM FAMLVIVMAA FLSLPRQFQV MVVELKDQRD TWLSRRVFPI YILIFAFFAV PLGLAGQMLL GNTVPSDTYV LFLPDVTQQT WLTLFAFLGA VSAASSMVII SSIALSTMLS NEIVFPLLYR RQKVAQTDYD NFRKRLLNIR KLLALFVILL GYGVFIMASP DTLSSLGEVA FGAFAQLTPA LIAAFYWRRA SLMGVYAGIL VGFILWLTLN FLPQFGLYAS PFAEGFLPVK TTATLFSLGA NIIVMWALSQ ISRQSVQERV QASLFLEWQS PKLLKVEKKR QLDVQELELL ASRFVGLEKA QANFNSFLSS HDKKELGNVI YNQQLIQHTE NTLATVMGSS SARLVLSSAL DGRDIALEEL AVLVEDASSQ QQEFSQHLLQ SAIENASEGI SIVDDELRLV AWNKKYLDLF EYPPELVYMG SPISALIRHN VKRGLCGSGD IESQVERRLD FLRKGSPHSS ERQQVSGQTI RIEGNPLPGG GFVMLFSDIT AYRQAEQVLK EANLDLETRV YERTLTLAKT NEALAKAHEK AEQAHLKKSQ YLNACSHDLM QPLEAARLFT SALSEQNNLT TDQQRQVENI DRSLKAANDL LADLAEIARL ESGNIKANIQ AFALNELFED LAQEFSALAI EKSVEFRLAV SKVWVKSDRH LLRRIIQNLV GNAFRYASPG KVLLGARVFN NQVIIQILDN GPGIPVEKQV LVFEQFTQLN TPNNHAGRGL GLGLNITQSL AQLLGHTLSL QSKTMQGCKF SVQVEQAEPL VQSRIVNNPS FIVALKDITV LCIDNDPDVL SGMVELLSAW QCNILAADSR ETALEEFANH SNEIDILLVD YQLGYQTDDP QGKQVDGLTL ISDLRSQCHH SLPAILITAT TEPGIEDKAR SLDVGYMRKL VKPAALRAMM SAMLAKKLQA DYVGYS
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