Gene RSp1567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp1567 
SymbolcoxP 
ID1223879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1969710 
End bp1970414 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content63% 
IMG OID637241430 
Productcytochrome-C oxidase subunit III oxidoreductase protein 
Protein accessionNP_523126 
Protein GI17549786 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CCACGCTCCC GACCGATTCC ACCGAAGCCT TGCCGGATGC GATGCCCCAA 
GGCTGGCACG GCATCGTCAA CGACTGGTCG GCCGACCGCG AAGCCTTCAA GGTGCCGTGG
GGCAAGGCGA TGATGTGGAT CTTCCTGCTG TCGGACACCT TCATCTTCAG CAGCTTCCTG
ATCGGCTACA TGACGGTGCG CATATCGACC ACGGTGCCGT GGCCCAATCC GTCCGAGGTG
TTCGGCCTGA GGATCGGCAG CGTTGACGTG CCGCTGCTGC TGATCGCCAT CATGACCTTC
GTGCTCATCA GCAGCAGCGG CACCATGGCG ATGGCCGTCA ACTTCGGCTA CCGGCGCAAC
GCCAGGCGTG CCGCCGCGCT GATGCTGGCC ACCGCGCTGC TGGGCGCCAC CTTTGTCTCC
ATGCAAGCGT TCGAATGGAC CAAGCTGATC GTCCACGAAG GCGTGCGCCC ATGGGGCAAC
CCGCTGGGCG CGGCGCAGTT CGGTGCGTGC TTCTTCATGA TTACCGGATT CCACGGCTTT
CACGTGACCT GCGGCGTGAT CTACCTGCTG CTGATCGCGC GCAAGATCCT GCAGCCGGGC
TTTACCGAAC ACGGCAACTT CCAGATCGTC GAAATCGCGG GCCTGTACTG GCACTTCGTC
GACCTCGTCT GGGTGTTCAT CTTTGCGCTG TTCTACCTGT GGTGA
 
Protein sequence
MSTPTLPTDS TEALPDAMPQ GWHGIVNDWS ADREAFKVPW GKAMMWIFLL SDTFIFSSFL 
IGYMTVRIST TVPWPNPSEV FGLRIGSVDV PLLLIAIMTF VLISSSGTMA MAVNFGYRRN
ARRAAALMLA TALLGATFVS MQAFEWTKLI VHEGVRPWGN PLGAAQFGAC FFMITGFHGF
HVTCGVIYLL LIARKILQPG FTEHGNFQIV EIAGLYWHFV DLVWVFIFAL FYLW