| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1564 |
|---|
| Symbol | coxM |
|---|
| ID | 1223876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | + |
|---|
| Start bp | 1966181 |
|---|
| End bp | 1967335 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637241427 |
|---|
| Product | cytochrome C oxidase polypeptide II |
|---|
| Protein accession | NP_523123 |
|---|
| Protein GI | 17549783 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTTG CGATTGCATT GATCCTCATC ATCGTGCTGG CGGTGGGGTT TCACTTTGCC
AGCCCCTGGT GGATCACACC GATCGCATCG AACTGGGTGC GCATGGACGA CACGCTGACG
ATCACCATCG TCATCACCGG CACGCTCTTC ATCGCGGTCA ATCTGTTCGT GGTGGCCGCG
CTGCTGCGTT ACCGGCACCG CGACGGCCAT CGCGCCGCCT ACGAACCGCA CAACCGGCGG
CTGGAGTGGT GGCTGATCGG CGTGACGGCG GTCGGCGTGG CGGCGCTGCT GGCGCCCGGC
CTCTTCGTCT ATGCCGACTA CGTGCGGCCG CCGCCCGGCG CGCTGCAGCT CGAAGTGCTC
GGCCAGCAAT GGCAATGGCG CTTCCGCTTC CCCGGCCCCG GCGGCAAGCT GGGCACGACG
GACACGCGCT ACATCAGCGA CGACAACCCG TTCGGCCTGA ACCCCGCCGA TCCCAACGGC
CGCGACAACC ACCTGATCGA GACGCCCGAG CTGCACCTGC CGCTCAACCG GCCGGTGCAG
GTCCTCACGC GCTCGCGCGA CGTGCTGCAC GACTTCTATG TGCCGCCGTT CCGGGCCCGC
ATGAACATGG TGCCCGGCAT GGTCACCACC TTCTGGTTCA CGCCGACCAG GGCCGGCCGC
TACGACATCC TCTGCGCCCA GCTCTGCGGC ATCGGGCATG CCGGCATGCG CGGCGTGGTG
GTGGTGGAAG ACGAAGCCGC GTTCACCCGC TGGCTGCAAC AGCAGCCGAC CTTCGCGCAA
CGGCAGCAGG CCACGGTGCA GGCGGCCTCC GCGACGGCCG GCGCCAGTGC CGGCGCCCAG
GCCATGGCCG ACCAGGGCAA GACGCTGGCG CAGGCCAAGG GCTGCGTCGC CTGCCACAGC
GTGGACGGCA GCCCCGGCGT CGGCCCCACC TGGAAGGGCC TGTACGGCAA GACCGAAACC
ATGGCCGACG GCAGCACCGC GCCGGTGGAT GACGCCTATC TGCGTGCGTT CATCCGCGAC
CCGAAGGCGC GCGTGGTCAA GGGCTTCGCG CCGGTCATGC CGAACTTCGA CCTGAGCGAG
CAGGAGTTGT CCGCCCTGGT GGCCTACATC AAGGCGCAGG GCGGCCCAGG CGCCGCCAGC
GCGGCCAAAC CCTAG
|
|---|
| Protein sequence | MALAIALILI IVLAVGFHFA SPWWITPIAS NWVRMDDTLT ITIVITGTLF IAVNLFVVAA
LLRYRHRDGH RAAYEPHNRR LEWWLIGVTA VGVAALLAPG LFVYADYVRP PPGALQLEVL
GQQWQWRFRF PGPGGKLGTT DTRYISDDNP FGLNPADPNG RDNHLIETPE LHLPLNRPVQ
VLTRSRDVLH DFYVPPFRAR MNMVPGMVTT FWFTPTRAGR YDILCAQLCG IGHAGMRGVV
VVEDEAAFTR WLQQQPTFAQ RQQATVQAAS ATAGASAGAQ AMADQGKTLA QAKGCVACHS
VDGSPGVGPT WKGLYGKTET MADGSTAPVD DAYLRAFIRD PKARVVKGFA PVMPNFDLSE
QELSALVAYI KAQGGPGAAS AAKP
|
|---|
| |