| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1185 |
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| Symbol | dsd |
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| ID | 1223497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1506589 |
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| End bp | 1507866 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637241050 |
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| Product | D-serine deaminase |
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| Protein accession | NP_522746 |
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| Protein GI | 17549406 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3616] Predicted amino acid aldolase or racemase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.867935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATA CAAAGTACCA AGGCGAGGCC GCCGCAGTGG TCGATCCGCT CGACAAGGGG
CTGGGCGCGC TCGATGCCGC GTGCACCCCG GAGCAGGTCG CCGCGCAGCG CTGGAACCTG
CTGAACGAAG ACCTCAGCCT GCCGGCGGCG GTGCTGTCGC ACGCGAGGCT GGAGCACAAC
CTGGCCTGGA TGCAGCGCTT CGTGGGCGAG TACGGCGCCA AGCTCGCGCC GCACGGCAAG
ACGACGATGG CGCCGCGCCT GTTCCAGCGC CAGCTGGCCG GCGGCGCGTG GGGCATCACG
CTGGCGACCG CGCACCAGAC GCGCATCGCC TACGTGCACG GCGTGCGCCG CGTGCTGATG
GCCAACCAGC TCGTCGGCAA GCGCAACATG GCGATCCTGG CCGAGCTGCT GGCCGATCCG
TCGTTCGAGT TCTTCTGCCT GGTGGATGCG GCCGACCAGG TCGATCAGCT GGCGGCGTTT
TTCGGCAAGG CCGGCCGGCC GATCCAGGTG CTGATCGAGC TGGGCGAGCA GGGCGGGCGT
ACCGGCGTGC GCGACGATGC GCAGCTGCGC TCGGTGCTGG CGGCGCTGGA TCGGGCCGGC
GGCGCGGTCA GGCTGGCCGG CGTGGAGGTC TACGAGGGCG TGCTGAAGGC GGAGGGCGAA
ATCCGCGCGT TCCTGCAGCG CGCCGTCAGG GTGTTCCATG ATCTCGCCGC AGCCGGCCGC
CTGCAGCGCA CGCCGCCGGT GCTGACCGGC GCCGGCTCGG CCTGGTACGA CGTGGTGGCC
GAGGAGTTCT CCAAGGCCGA CATCGGCCGG CCGTTCGACC CGGTGCTGCG CCCCGGCTGC
TATCTCACGC ACGACGTGGG CATCTACAAG GCGGCGCAGG CGCAGATCAA CGTGCGCAAC
CCGGTCGCGC ACCGGATGCG CTCCAGCCTG CTGCCGGCGC TGCAGGTGTG GGCCTATGTG
CAATCGGTGC CGGAGCCCGA GCGCGCCATC GTGGCGCTGG GCAAGCGCGA TGCCGCCTTC
GATGCCGGTT TCCCGCAGCC GGCGCAGCGC TATCGCCCGG GCGAGGCGTC GCCCACGGAC
GTGCCGGCGC ACTGGGAAGT CACCGGCATG ATGGACCAGC ACGCCTATCT CAGGATCGCC
GCCGGCGACG ACATCAAGGT CGGCGACATG ATCGCCTTCG ACATCTCGCA CCCCTGCCTG
ACCTTCGACA AGTGGCGGCA GATTCCCGTC ATCGATGACG CCTACAACGT CGTCGACGTG
GTGCAGACGT ACTTCTGA
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| Protein sequence | MNDTKYQGEA AAVVDPLDKG LGALDAACTP EQVAAQRWNL LNEDLSLPAA VLSHARLEHN
LAWMQRFVGE YGAKLAPHGK TTMAPRLFQR QLAGGAWGIT LATAHQTRIA YVHGVRRVLM
ANQLVGKRNM AILAELLADP SFEFFCLVDA ADQVDQLAAF FGKAGRPIQV LIELGEQGGR
TGVRDDAQLR SVLAALDRAG GAVRLAGVEV YEGVLKAEGE IRAFLQRAVR VFHDLAAAGR
LQRTPPVLTG AGSAWYDVVA EEFSKADIGR PFDPVLRPGC YLTHDVGIYK AAQAQINVRN
PVAHRMRSSL LPALQVWAYV QSVPEPERAI VALGKRDAAF DAGFPQPAQR YRPGEASPTD
VPAHWEVTGM MDQHAYLRIA AGDDIKVGDM IAFDISHPCL TFDKWRQIPV IDDAYNVVDV
VQTYF
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