| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1085 |
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| Symbol | cpaF2 |
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| ID | 1223397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1376464 |
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| End bp | 1377816 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637240950 |
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| Product | secretion ATPase protein |
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| Protein accession | NP_522646 |
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| Protein GI | 17549306 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAC CCATCGAGTT CTCCAACCAG ACCGACGCGG GCAACGGCGC GTTTGCCGTC
TCGCAGGCCT TCCAGGACAT CAAGGAAGCC GCGCACGAGC ACCTGCTGAC CCGCATCGAG
GAGCTTGGCG CCGAGTTCGG CCGGTGGTCG CGCAGCGCCA TCCAGCGCTT CGTGGACCTG
GAGGTCGAGG GCTTCACCCG CATGCGCCGC ATTCCCGTCA ACGAGACCGA GGTGCGGGAG
ATCGCCGAGG CGCTGACCAA GGAGCTGGCC GGCTTCGGAC CGATCGAAGA CCTGCTGGCC
GACCCGGCGG TGGAAGACAT CCTGGTCAAT GGCCACCTGG ACGTGTATGT GTCGCGGCAT
GGCGTGCTGG AGCGCATTCC GGTGCGCTTT GCCGACAACA ACCACCTGCT GCGCATCGTG
CGCCGCATCC TCGCGCCGAT CGGGCGCCGG CTGGACGAGT CGAACCCGAT GGTCGATGCC
CGCCTGCCGG ACGGCGGCCG CATCAACGTG GTGATTCCGC CGCTGGCGCT GGAAGGGCCG
GTGGTGTCGA TCCGCAAGTT CCGCAAGGAT CCGCTCAAGC CCGAAGACCT GCTCGGCCTG
GGCACCATGA ACGAAGAGAT CGGGGAGCTG CTGCGCGCGG CGGTGCGGGC GCGCTGCAAC
ATCCTCGTCA GCGGCGGGAC CAGCTCGGGC AAGACCTCGC TGCTCAATGC GCTGGCGTAT
CACATCCCGA CCACCGAGCG GGTCATCACC ATCGAAGACA CGGCGGAGCT TTCGCTCAAC
CACCCGCACG TGGTGCGGCT GGAAAGCCGG CCCGGCGGCT TCGAGGGCAC GGGCGTGGTC
ACCATCCGCG AGCTGCTGCG CAACAGCCTG CGGATGCGGC CCGACCGCAT CATCGTGGGT
GAAGTGCGCG GCGGCGAGGT GCTGGAGATG CTGCAGGCCA TGAGCACCGG CCACGACGGG
TCGATGGGCA CGATCCACTC CAGCAGCCCG CGCGAGTGCC TGTACCGGCT GGAGATGCTG
GCGGGCTTTG CCGGCTTCCA GGGCAGCGAG GTGAGTCTGC GGCGGCAGAT CACCAATGCC
ATCGACTTCA TCGTCCAGAT CGGGCGGCTG TCCAACGGCA AGCGGCGCAT CCTGTCGGTG
ACGGAGATCA CCGGGCTGGG CGACAACATC GTCTCCACGC AGGAGCTGTA CCGCTACGAA
CCCTATATCG GCCCCGACGG CGAAGAGCTG GACCGCTGGA CGTCGCTCGG CCTGCAGCCG
CATTCGCCCA AGCTGGCGCG CATGCGCAAC GCGGCGGCGG ATGGCGGCGG CCTGGGTGCC
GGCTTCGGCG GGGGAGGACG CTTCCATGTC TGA
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| Protein sequence | MTQPIEFSNQ TDAGNGAFAV SQAFQDIKEA AHEHLLTRIE ELGAEFGRWS RSAIQRFVDL
EVEGFTRMRR IPVNETEVRE IAEALTKELA GFGPIEDLLA DPAVEDILVN GHLDVYVSRH
GVLERIPVRF ADNNHLLRIV RRILAPIGRR LDESNPMVDA RLPDGGRINV VIPPLALEGP
VVSIRKFRKD PLKPEDLLGL GTMNEEIGEL LRAAVRARCN ILVSGGTSSG KTSLLNALAY
HIPTTERVIT IEDTAELSLN HPHVVRLESR PGGFEGTGVV TIRELLRNSL RMRPDRIIVG
EVRGGEVLEM LQAMSTGHDG SMGTIHSSSP RECLYRLEML AGFAGFQGSE VSLRRQITNA
IDFIVQIGRL SNGKRRILSV TEITGLGDNI VSTQELYRYE PYIGPDGEEL DRWTSLGLQP
HSPKLARMRN AAADGGGLGA GFGGGGRFHV
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