Gene RSp0984 details

Gene Information

• Locus tag: RSp0984
• Symbol: thiE2
• ID: 1223296
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003296
• Strand: -
• Start bp: 1239117
• End bp: 1239713
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637240849
• Product: putative thiamine-phosphate pyrophosphorylase protein
• Protein accession: NP_522545
• Protein GI: 17549205
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0352] Thiamine monophosphate synthase
• TIGRFAM ID: [TIGR00693] thiamine-phosphate pyrophosphorylase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.462651
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGAAGCG TTTCTCTTCC GGATTTCTAC CAGGTCACGC CCGAGCCGGC CGGCTCGCCA 
AATTTTGAGC CGTTCTTCGC TGAACTGACC GACACGCTTC GGTCGGGTGT CCGCCTGCTT 
CAGCTTCGCG CAAAGCGGCT GGACTCGCGC GAGCACCTGG CGGTCGCGCA AAGGACGCGG 
GATCTGTGCC GCCAGTTTGG GACGATTCTG ATGCTCAATG GCCCGATCGA CATGGCCCGC 
GAGGCCGGCT GCGATGGCGT GCACCTGAGC AGCGATGCAT TGATGTCGCT GCGGTCGAGG 
CCCGTGCCTG AGACGATGCT GGTGTCCGCG GCCTGCCATA GCGCTGAGCA GCTGGAGCAA 
GCCGCCAGGA TGGCGGTGGA CTTTGTGACC CTGTCCCCGG TCCTGCCGAC GCGCACGCAT 
CCGGAGGCCG ACCCGCTCGG CTGGGAGCGC TTCGCCGCGC TGGTTCAGGG TGCGCGCATC 
CCGGTGTTCG CGCTGGGCGG CATGCGCCCG GACATGCTCG ATCAAGCCAA GCAGGCTGGC 
GCCTGGGGCA TCGCGGCGAT TTCCGCGACC TGGCGCCGCC CATCCGCCGG CGGCTGA 

 

Protein sequence

MRSVSLPDFY QVTPEPAGSP NFEPFFAELT DTLRSGVRLL QLRAKRLDSR EHLAVAQRTR 
DLCRQFGTIL MLNGPIDMAR EAGCDGVHLS SDALMSLRSR PVPETMLVSA ACHSAEQLEQ 
AARMAVDFVT LSPVLPTRTH PEADPLGWER FAALVQGARI PVFALGGMRP DMLDQAKQAG 
AWGIAAISAT WRRPSAGG