| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0834 |
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| Symbol | exuT1 |
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| ID | 1223141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1054167 |
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| End bp | 1055474 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637240694 |
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| Product | hexuronate transporter transmembrane protein |
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| Protein accession | NP_522395 |
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| Protein GI | 17549055 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00560856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACACGA TCAAAGGCCT GCGCTGGTGG ATGATCGGGC TGGTGCTGAC CGGCCTGATC
ATGAACTACC TGGCGCGCAA CGCACTGGCG GCCGCGGCGC CCGAAGTCAA CAAGGTGCTC
GGCATCACGA CGCAGCAGTA CGGCTACATC GTCGCCGCCT TCCAGGCCGC GTACATGGTG
ATGCAGCCGG TGGCCGGCTA CGTGCTGGAT GTGCTGGGCA CCAAGCTGGG CTTCGCGCTG
TTCGCCGGGG CCTGGTCGGT GGTCTGCATC CTGCACAGCA CGGCGGGCAA CTGGGTGTCG
CTGGCGGTGT TCCGCGCCAT GCTCGGGGTG ACCGAGGCGG CCGGCTTCCC GTCCGCCTTG
CGGGCGACGT CGGAATGGTT TCCCGCCAAG GAGCGCTCGA TCGCCACGGG CTGGTTCAAC
ATCGGCTCGT CGGTGGGCGC GCTGGTGGCG CCGCCGCTGG TGGTCTGGTG CATCCTGCAC
GGCAACTGGC GCTTCGCCTT CGCGGTGATC GGCGTGCTCG GGCTGGTGTG GAGCGCGCTG
TGGTTCATGC TCTACCGGGT ACCGGCCCGG CATCCGCGCC TGTCCGCCGA GGAGCACGCC
TACATCCGCG CGGGGCAGGA GACGCCGGCG CCCGGCGCCG ATGCCGTCAA GCCGTCGTGG
CGCGAGATCA TGTCGGGCCG GCGCTTCTGG GGGATCGCCA TCCCGCGCTT TCTCACCGAG
CCGGCGTGGC AGACCTTCAA CTTCTGGATC CCGCTCTACA TGGCGACCGA GCGCCACATG
AACCTCAAGG AAATCGCCAT GTTCGCGTGG CTGCCGTTCC TGGCGGCGGA CGTCGGCTGC
GTGCTGGGCG GCTATCTGGC GCCGTGGTAC CAGAAGCGCT TCTCCACATC GCTGATCACC
TCGCGCAAGA TGGTGATGGT GACGGGCGCG GTCTGCATGA TCGGCCCGGC CTGCATCGGC
CTGGCCACCA GTCCCTACAC GGCGATCGCG CTGTTCTGCG TCGGCGGCTT CGCGCACCAG
ACGCTGTCGG GCGCGCTGTA CACGCTGACC TCGGACGTGT TCGGCAAGCA TGAGGTCGGC
ACCGCCGTGG GGCTGGCGGG CATGTCGGGC TTCCTGGGCG GCACGCTGTT CTCGCTGGCC
GTCGGCACGC TGGCCTCGAC CATCGGCTAC AACCCGCTGT TCGCGGCGCT GGCCCTGTTC
GACATCGCCG CCGCGATCGT CATGTGGAAC GTGCTGCGCG AGCCGCGCCG CCCGATGGCG
ATGCCGGCGG GCGAGCTGGG CGCCGCACCG CGCGTGGCCG GCAGCTGA
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| Protein sequence | MNTIKGLRWW MIGLVLTGLI MNYLARNALA AAAPEVNKVL GITTQQYGYI VAAFQAAYMV
MQPVAGYVLD VLGTKLGFAL FAGAWSVVCI LHSTAGNWVS LAVFRAMLGV TEAAGFPSAL
RATSEWFPAK ERSIATGWFN IGSSVGALVA PPLVVWCILH GNWRFAFAVI GVLGLVWSAL
WFMLYRVPAR HPRLSAEEHA YIRAGQETPA PGADAVKPSW REIMSGRRFW GIAIPRFLTE
PAWQTFNFWI PLYMATERHM NLKEIAMFAW LPFLAADVGC VLGGYLAPWY QKRFSTSLIT
SRKMVMVTGA VCMIGPACIG LATSPYTAIA LFCVGGFAHQ TLSGALYTLT SDVFGKHEVG
TAVGLAGMSG FLGGTLFSLA VGTLASTIGY NPLFAALALF DIAAAIVMWN VLREPRRPMA
MPAGELGAAP RVAGS
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