| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0053 |
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| Symbol | fdhA |
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| ID | 1222601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 59223 |
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| End bp | 60419 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637239912 |
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| Product | glutathione-independent formaldehyde dehydrogenase oxidoreductase protein |
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| Protein accession | NP_521614 |
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| Protein GI | 17548274 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR02819] formaldehyde dehydrogenase, glutathione-independent |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.085418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACA ACCGAGGTGT CGTATATCTT GGCCCGGGCA AGGTCGAGGT GCAGAAGATC
GACTATCCGA AGATGGTCGA CCCAAGCGGC CGCGCGATCG GCCACGGGGT GATCCTCAAG
GTCGTGAGCA CGAACATCTG CGGGTCGGAT CAGCACATGG TGCGTGGCCG TACGACGGCT
CCCGCCGGGC TCGTGCTGGG TCATGAGATC ACTGGTGAGG TAGTCGAGAT CGGCCGCGAT
GTCGAAACAT TGAAGATCGG CGATCTGGTC TCCGTGCCGT TCAACGTGGC GTGCGGACGC
TGCGCGATGT GCAAGGAGCA ACACACTGGC GTTTGCCTGA GCGTCAACCC GGCCCGCGCT
GGCGGCGCGT ATGGCTACGT CGACATGGGC GGGTGGATTG GCGGGCAGGC CGAGTACGTG
CTGGTGCCGT ATGCGGATTT CAACCTGCTG AAGTTTCCCG ATCGCGACCA GGCCATGGCG
AAGATCCGCG ATCTCACGTG TCTGTCGGAC ATCTTGCCGA CCGGCTATCA CGGTGCCGTC
ACGGCGGGGG TGAAGCCGGG CTCCACGGTC TACATTGCCG GTGCCGGCCC GGTCGGCATG
GCGGCTGCCG CGTCGGCGCG CCTGCTGGGC GCCGCATGCA CTATCGTCGG TGACATGAAT
CCGGCGCGCC TTGCGCACGC GAAGGCAATG GGCTTTGAAG TGGTCGACCT GTCGAAAGAT
GCGACGCTTG GCGAGCAGAT TGCCGAGATT CTCGGCACGC CCGAAGTCGA CTGCGCGGTC
GATTGCGTTG GCTTTGAGGC CCACGGCCAT GGCTCAGGCC ATACGGAGGA AGCGCCGGCA
ACGGTGCTGA ATTCGCTGAT GGAAATTACG CGGCCTGCCG GTGCGATCGG GATTCCGGGT
CTGTACGTCA CCGACGATCC GGGTGCGAAG GATGTGGCCG CCAAGCACGG GGGCCTGAGC
ATCCGCTTCG GCCTTGGCTG GGCGAAGTCG CATTCCTTCC ATACCGGGCA GACGCCGGTG
CTCAAGTACA ACCGGAACTT GATGCAGGCG ATTTTGCACA ACCGTCTGCC GATCGCGGAG
ATCGTCAACG TGTCGGTCAT CTCGCTGGAC CAGGCGCCCG AAGGCTACAA GCAATTTGAT
GGCGGCGCGC CGCGCAAGTT TGTCATTGAT CCGCACGGGC TGCTCGCAGC GGCCTGA
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| Protein sequence | MSNNRGVVYL GPGKVEVQKI DYPKMVDPSG RAIGHGVILK VVSTNICGSD QHMVRGRTTA
PAGLVLGHEI TGEVVEIGRD VETLKIGDLV SVPFNVACGR CAMCKEQHTG VCLSVNPARA
GGAYGYVDMG GWIGGQAEYV LVPYADFNLL KFPDRDQAMA KIRDLTCLSD ILPTGYHGAV
TAGVKPGSTV YIAGAGPVGM AAAASARLLG AACTIVGDMN PARLAHAKAM GFEVVDLSKD
ATLGEQIAEI LGTPEVDCAV DCVGFEAHGH GSGHTEEAPA TVLNSLMEIT RPAGAIGIPG
LYVTDDPGAK DVAAKHGGLS IRFGLGWAKS HSFHTGQTPV LKYNRNLMQA ILHNRLPIAE
IVNVSVISLD QAPEGYKQFD GGAPRKFVID PHGLLAAA
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