| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05653 |
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| Symbol | RSp1328 |
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| ID | 1223640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1678048 |
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| End bp | 1679487 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637241191 |
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| Product | putative efflux PUMP antibiotic resistance transmembrane protein |
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| Protein accession | NP_522887 |
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| Protein GI | 17549547 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCT GGAAGGCCCC GAAAAAGCGA GCGCATATGA CAACGCATTC GGCTACCGCT
GAGGTCGCGA CACAAGAGGT AACGCTTTCC ACCGCGCGAC GCCGCATGTG CATGGCAGCA
TTGATGACAG CTGCCATTCT TGCTGCACTG GACACCACCA TCGCGAACAC GGCGCTACCC
GAAATCGCTG TGGATCTACA CTCAAGCGAG GCAACGATCA TCTGGGTAAC CAATGCCTAT
CAAATTGCAA TGATCGCGGC GCTATTGCCA TTTGCCGCAC TCGGAGAATC TATTGGTTAC
CGAAGGGTGT TTATTGGCGG CTTGACACTC TTCGGTATCG CCTCTGCGAT CTGCGGCAGC
TCTTCGACTC TAGCACTGCT AGTCGTCGGG CGCGCGATGC AGGGAGTGGG CGCGGCCGCC
ATTATGAGTG TCATCGCCGC ATTTATTCGA CACATCCATC CCCCAAAGAT GCTGGGGCGG
GGTCTGAGTA CGCATGCTCT AGTCGTAGCC ATTGGGTTCA CGCTGGGTCC TGTCGTCGCA
TCGACCATCC TCACGGTCGC GAGTTGGCAC TGGCTGTTTG GCGTCAACGT GCCGGTGGCA
GCTGCGGCAA TCGTCCTATC TGTCTTATAT CTCCCGGATG TCGCGGGCGG AAGACATCGA
TTTGAATCCA CCTCTGCTGC GTTGTGCACG GCGTTCTTTG GACTTCTGAT GTTCGGCATC
TGCTTGATGG AGAATGAAGG CGGGAGCGTC GTGGCAGTTC TCTGTACCCT TTCGTCGCTG
GCGTGTGCAA TCGGTCTGAT GCGCAAGCAA AGAGGACATC CGGCACCAAT GCTCGCGGTA
GATCTCATGG CGATTCGAAC GGTAAGACTC TCGTCTCTAA CCTCGATTTG CGCTTTTGCT
ACCCAATCGC TGGCGCTCGT CTCGTTGCCA TTTCTCCTTC AGGGCACCTT CGGCATGCCA
GTGGCCCGAA CTGGCTTCGT GATTGCCGCG TGGCCCCTCC TCGTGGCCGT CATGGCCGTA
GCCGTCGCCC CGCTTAGCGA TAGATATCCA TCCGGCTTGC TTTGCAGTGT AGGGCTCATC
GTCCTGACTC TTGGGATGGT TTCGTTGGCG ACGATGAGCG GTAGCGTTTC GAGCATGACT
ATCGCGGTTC GGCTCGCCGT ATGCGGGATC GGATTCGGAC TGTTTCAGTC GCCGAACATG
CGAGAAATCA TGAGCGGCGC GACAGCGGTC CGCAGCGGTG GGGCAAGCGC CATTGTGGCG
ATTTCACGGC TGATCGGGCA GACCTTCGGT GCCGGCCTGG TCGCTCAATG CTTTCACTTG
TGGCCCGCAT CGGGACCGCA GATGGCGGTA TGCCTGGGCG GTGCTTGCGC ACTGTTGGGG
TGCCTTTTTA GCGCGATGCG TTTGACGGGG CGTGCCGGCA CGGAGCCCGC CAAGGCCTAG
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| Protein sequence | MNIWKAPKKR AHMTTHSATA EVATQEVTLS TARRRMCMAA LMTAAILAAL DTTIANTALP
EIAVDLHSSE ATIIWVTNAY QIAMIAALLP FAALGESIGY RRVFIGGLTL FGIASAICGS
SSTLALLVVG RAMQGVGAAA IMSVIAAFIR HIHPPKMLGR GLSTHALVVA IGFTLGPVVA
STILTVASWH WLFGVNVPVA AAAIVLSVLY LPDVAGGRHR FESTSAALCT AFFGLLMFGI
CLMENEGGSV VAVLCTLSSL ACAIGLMRKQ RGHPAPMLAV DLMAIRTVRL SSLTSICAFA
TQSLALVSLP FLLQGTFGMP VARTGFVIAA WPLLVAVMAV AVAPLSDRYP SGLLCSVGLI
VLTLGMVSLA TMSGSVSSMT IAVRLAVCGI GFGLFQSPNM REIMSGATAV RSGGASAIVA
ISRLIGQTFG AGLVAQCFHL WPASGPQMAV CLGGACALLG CLFSAMRLTG RAGTEPAKA
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