| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05470 |
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| Symbol | RSp1142 |
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| ID | 1223454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1442116 |
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| End bp | 1443186 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637241007 |
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| Product | putative transcription regulator protein |
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| Protein accession | NP_522703 |
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| Protein GI | 17549363 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.130575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACGG TTGCCGGACA ATGCCGCCCC ATGGACCTGA CGACGACCGA CTTGCGCACC
CTGCTGGACA TCACCGGCGC CCTCCACGAG CCGTCCGCCG ACAGCTTCGT GGATCGCCCC
GACGTGGTGG GCAAGCTGAG CGCCTTGCTG CATGCCGACA TCGTCGGCCA CCTCGTCTGG
GCCGATCGCG GGCGCAGTCT GCTGGAGCCC GGCGCATGGG GCCGCGACGG GGGCATGAAC
CTGGAGTACC GGGCGCATTT CCAGGCAGTC GATCCGATCG CGCCCTTGCT GCGCAGCTGT
CCGGGGCCGC TGGTGATCGA GCGGCTGATT GGCCGCAACG CATTGCAGTG CACGGAGTAC
TTCGCCGATT TCCTGGCCCG CTACAAGGTC TACCCCGGCG TCAGCATGTA TCTGGAAGAT
GCGGATGGCA CGCTGCTCGA CTATCGTTTT GGCACGAGCG ATCCGGGCAA GCGCTTCGGC
GAGCGCGAGG TCACCCTGCT GACCCTGCTC CAGCCGCACT TGCTCAACGC GCAGCGCCTG
CGGCAGACCG CCCGTGCCGA GCGCGAGGCG GCCTGCGCCG GGGCGGACGG TGCGTGCTTT
CCGTGCTTCC TGCTGGTCGG CGGCAGGCCT CCGCAGCCCG ACCGCAGGGC GCTTGCGCTG
ATGGCGGGGC TGGACACGCA CGAGCGGGAG GCGCTGCTCG ACCGCCTGGC GCGGATCGGC
GCGGGCGCGC CGGCCCAGCT GCGGTGGAAC GGCTTCAACC TGTGCGTGGA GCGCGCCCCC
CGTGGCGCCG ACGGACAGCC GTGGTGCCAG GTGCATCTGC TGGCCCATAC CGTCGGGTCG
GCGGCGTGGC TGCAGCAGCG GTTCGGCATG ACGCTGCGCG AAGGCGAGGT TTGCCACCTC
ATGCTGCAAG GACAGTCGGA CAAGCAGATC GCCCTCGCGC TGCGCATCAG CTACTGGACC
GTGCGCGCCC ACGTCGGGCG CGTGCTGGAC AAGCTTGGGG TCGAGTCCCG CTCGGCGATC
GGCCGGGCGG TGCTCAGCGC CAGCCGGTGC GGGCCGGGCG GGGACGGGTA A
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| Protein sequence | MPTVAGQCRP MDLTTTDLRT LLDITGALHE PSADSFVDRP DVVGKLSALL HADIVGHLVW
ADRGRSLLEP GAWGRDGGMN LEYRAHFQAV DPIAPLLRSC PGPLVIERLI GRNALQCTEY
FADFLARYKV YPGVSMYLED ADGTLLDYRF GTSDPGKRFG EREVTLLTLL QPHLLNAQRL
RQTARAEREA ACAGADGACF PCFLLVGGRP PQPDRRALAL MAGLDTHERE ALLDRLARIG
AGAPAQLRWN GFNLCVERAP RGADGQPWCQ VHLLAHTVGS AAWLQQRFGM TLREGEVCHL
MLQGQSDKQI ALALRISYWT VRAHVGRVLD KLGVESRSAI GRAVLSASRC GPGGDG
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