| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05452 |
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| Symbol | RSp0316 |
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| ID | 1222448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 414288 |
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| End bp | 415295 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637240176 |
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| Product | putative transmembrane protein |
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| Protein accession | NP_521877 |
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| Protein GI | 17548537 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.111761 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTGC CGCCGATCCT GCAGAACCGC CTGTCCGTGC CCGTGGTGGG CTCGCCGCTG
TTCATCATCT CCAATCCGGA TCTCGTGATC GCCCAGTGCA AGGCCGGCGT GGTCGGCTCG
TTCCCGGCGC TGAACGCGCG CCCGGCCGAG CTGCTGGAGA CCTGGCTGCA GCGCATCACC
ACGGCGCTGG CCGAATACGA TGCGCAGCAT CCGGACAAGC CCTCGGCGCC GTTCGCCGTC
AACCAGATCG TGCACAAGTC CAACGACCGG CTCGAGCACG ACCTGGCACT GTGCGTGAAA
TACAAGGTGC CCATCGTCAT CACCTCGCTG GGCGCGCGCG AGGAGGTCAA CCACGCGGTG
CACAGCTATG GCGGCATCGT GCTGCATGAC GTCATCAACA ACACCTTCGC CAAGAAGGCG
ATCGACAAGG GCGCGGACGG GCTGATCGCG GTGGCGGCCG GGGCGGGCGG CCATGCGGGC
ACGACCTCGC CGTTCGCGCT GATCCACGAG ATCCGCGAGT GGTTCGACGG CCCGCTGCTG
CTGTCGGGCG CCATCGCCAA CGGCAATGCC ATCCTGGCGG CGCTGGCGGC CGGGGCGGAC
CTGGCCTACG TGGGCTCGGC CTTCATCGCC ACCGAAGAGG CGAATGCGAT CGAAGCCTAC
AAGCAGGCCA TCGTGGAGAG CACCGCCAGC GACATCATCT ACACCAACCT GTTCACCGGC
GTGCACGGCA ACTACCTGCG CAAGAGCATC GTGGCGTCCG GCCTGGACCC GGACGCGCTA
CCGGAGTCGG ACCCGAGCAA GATGAACTTC GGCTCGGGCG ACGGTGCCAA GGCCAAGGCC
TGGAAGGACA TCTGGGGCGC CGGCCAGGGC GTGGGCGCGG TCAAGCGCGT GGTGCCGGCG
GCGGAGTTGG TCAGGCGCTT CGCGAAGGAG TTCGAGATGG CGCGCCGACG CCTCGGCCAT
ATCGAGGCGC TGCGCGCGCC GACCGGCGCT TCGGCGACGA CGGCCTGA
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| Protein sequence | MSLPPILQNR LSVPVVGSPL FIISNPDLVI AQCKAGVVGS FPALNARPAE LLETWLQRIT
TALAEYDAQH PDKPSAPFAV NQIVHKSNDR LEHDLALCVK YKVPIVITSL GAREEVNHAV
HSYGGIVLHD VINNTFAKKA IDKGADGLIA VAAGAGGHAG TTSPFALIHE IREWFDGPLL
LSGAIANGNA ILAALAAGAD LAYVGSAFIA TEEANAIEAY KQAIVESTAS DIIYTNLFTG
VHGNYLRKSI VASGLDPDAL PESDPSKMNF GSGDGAKAKA WKDIWGAGQG VGAVKRVVPA
AELVRRFAKE FEMARRRLGH IEALRAPTGA SATTA
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