| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05450 |
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| Symbol | RSp1148 |
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| ID | 1223460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1447661 |
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| End bp | 1448899 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637241013 |
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| Product | putative hydrolase signal peptide protein |
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| Protein accession | NP_522709 |
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| Protein GI | 17549369 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.111492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAACC TCACCTTCCG GGTGGTGTGT GCCCTGGCAC TGGCCGTTGC ATCCGGCACC
ACGATGGCAG CCTCTGCCAT CGCGGTGCTG GGCAAGGACT TTGCGTTCCC CAGCAAGATC
CAAGGCCTCC CCGAAAAGCT TTCGGACTTC AAGGACCTGC GAATCAATAC CTTCACCACC
AGCGACGGCG TGAAGCTGTC TTACTGGGAG GCGGGAGAAG GGGAACCCCT GATCTTCGTA
CCGGGTTGGT CAGCCAACGG CGCGCAGTAC ATCAACGTGA TGTATCTGCT GCGTCGGCAC
TACCACGTGT ATGTACTCGA CGTCCGTAAC CAGGGGCTGT CCGAACGTGT GGACTACGGC
GTCCGCATTT CACGGTTTGC CGCCGACCTG AAGGAGTTCA GCGATCACCT GGGCCTGAAG
CAAGCGGATT ACTGCGGCTG GTCGATGGGG GCCTCGGTGC TGTGGAGCTA TATCGATCTG
TTCGGCACTC GGGGCATCCA CAAAGCCGTG TTCGTCGACG AGCCGATCTC AATCTACTCG
CATCAGGACT GGAGCGAGCA AGAGAGGCTC GACGCCGGCG GCACAACGAC CTCGCCCGAA
CGCATGATCG CAGGCTTCGT CCGGGGCGCG CCGCTCAACA GCCTGGTCAC CGACCTGGCG
CCGTGGCAAC ACGCGATGGC CAAGGATTCG CTCAGCTACG TGAACTCCGA GGCGTTCGCC
AATGCCTTCG TCAAGAACGA TCCGCAGGCG ATGGGCGAGG TGCTGTTCGA CCACATCACC
AATGACTGGC GCGACGTCGT CAAGCACAAG CTCAACGTAC CGGTGGCAAT CTTCTCCGGC
GACTACAGCA ACAACCTGCC GAGCCAGCGC TGGATGCATA AGACCATTCC CGGATCGAAA
CTGTTCGTCT ATTCCAAGGC TGAACAGGGC GATCACTTCC TGATGTTCAA GAATCCGTTC
AAATTCACCG CCGACCTCCG CGCGTTTCTG GCGGATGAGA TGCCGCAGGA TGTGCAAACG
CGCCGCGAAC GCGCTGTCCA GGAAAGCGTT GCAGGCGATG GCGCGCATGC GGTCGAGTCT
TACCGCCTCT CAGAGCCACC CCTTTCAAGG TCTTTCCGCC CGGGCCTTTT TGAGTACGCG
GGCAGTGCAG ACATGGGCTC GGGCGATGCT GCCGTCCACA TAGCCCGTGG GCTTGTCGAT
CTTGGGGCCG CGTTTGCTCG TGGCCACTTG CGTGGGTGA
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| Protein sequence | MRNLTFRVVC ALALAVASGT TMAASAIAVL GKDFAFPSKI QGLPEKLSDF KDLRINTFTT
SDGVKLSYWE AGEGEPLIFV PGWSANGAQY INVMYLLRRH YHVYVLDVRN QGLSERVDYG
VRISRFAADL KEFSDHLGLK QADYCGWSMG ASVLWSYIDL FGTRGIHKAV FVDEPISIYS
HQDWSEQERL DAGGTTTSPE RMIAGFVRGA PLNSLVTDLA PWQHAMAKDS LSYVNSEAFA
NAFVKNDPQA MGEVLFDHIT NDWRDVVKHK LNVPVAIFSG DYSNNLPSQR WMHKTIPGSK
LFVYSKAEQG DHFLMFKNPF KFTADLRAFL ADEMPQDVQT RRERAVQESV AGDGAHAVES
YRLSEPPLSR SFRPGLFEYA GSADMGSGDA AVHIARGLVD LGAAFARGHL RG
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