| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05448 |
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| Symbol | RSp0319 |
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| ID | 1222451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 416986 |
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| End bp | 419340 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637240179 |
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| Product | metal-transporting P-type ATPase transmembrane protein |
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| Protein accession | NP_521880 |
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| Protein GI | 17548540 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.481945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0154482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCTC ACGACCACGC CCATGCCAAG CCCGCGCAGA CCGGTTGCAG CGGTTGCTGC
GGCCACGATC AACCGGCCGC GCGGGACACC GCTGTCCGCC CCGCGCCAGC GCCTGCGCCG
CATCCCGGCC ACGACCACGC GCACGATCCC CAGGCGGCGG CCGCCCCGGC CGATGCCGCC
GCGCGGGCCC GCGCCTCCGG CCGCACCCGC CTGCGCATCG CGCAGATGGA CTGCCCGACC
GAGGAACGGA TGATCCGCGC CCGCCTCGGC AACGCCGAAG GCGTGGTCGC GCTGGATTTC
AACCTGCTGG AGCGGCATCT CACCATCCAC CACACCGTCG ACGACGTCAC GCCGTTCCTG
GAAGCGCTGC GCGCCATCGG CATGGACGGC GAGGTGCTGG AGGCGCACGA TCGCGCGGCG
GCCGAGCCCG TGGCCGGGCC AGTAGGCGTG TCGCGCCGCG CCTGGCTGCT GGGGCTCGGC
GGCGTGGCGG CGTTCGGCGC GGAGGCCATC GCCTGGTCGC TCGGCGATCA TGCCTGGTCG
GTGCTGGGGC TGGCGCTGGC CTCCATCGCG CTGGCGGGCG GCCAGACGCT GCGCAAGGGC
TGGATCGCCC TGCGCGCGCT CGCGTTCAAC ATCCATTTCC TGATGGCCGT GGCCGTGATC
GGCGCGCTGC TGATCGGCAA ATGGGCCGAG GCCGCGATGG TGATCTTCCT GTTCGCCGTG
GCCGAGGCCA TCGAGGCGCG CGCGCTGGTC CGGGCCCGCG ATGCCGTCCG CGCGCTGACG
GCCATCGCGC CCGACACGGC GGAGGTGGCC GATGGGGCCG GCGGCTGGCG GGCGGCGGCG
GTCGAGTCGG TCGCCATGGG CACGCGCCTG CGCGTGCGCA CCGGCAGCCG CGTTCCGGTG
GACGCGCGCA TCGTCGCCGG CCGCGCCGCG CTGGACGAAT CGCCCGTCAC CGGCGAGAGC
CTGCCGGTGG AAAAGGCCAT CGGCGATAGC ATCCTCGCCG GCACTATCGT CACCGATGGC
GTGATCGAGG CCGAGGCCAC GGCGGTCGCC GCCGATAGCA CGCTCGCCCG CATCGCCGCG
GCCATCCAGG AAGCGCAGGC GCAGCGCGCG CCGACCCAGC GCTTCGTCGA CAAGTTCGCG
TCCCTCTACA CGCCCGCGAT GATGCTGCTC GCGCTGGCCG TCGCCGTGAT CGGCCCGCAG
GTGACGGCCG ACGGCTGGTT CGCGTGGACC TATCGCGCGC TCGTGCTGCT GGTGATCGCC
TGCCCATGCG CGCTGGTGAT CTCCACCCCG GTCACCGTGG TCAGCGGGCT GGCGGCGGCT
GCGCGGCGCG GCATCGTCGT CAAGGGCGGC GTCTATCTGG AAAGCGGCCG GCGCCTGCGC
GCGCTGGCGC TCGACAAGAC CGGCACCCTG ACCGCCGGCC GCCCGGTGCT GGATACGGTG
GCGCTGCCCG ACGGCACGCG CCGCGCGGTG ACGGCACTGA ATGCCGCGAC CGATGCCGCC
CAGCTGCGGG CGCTGGGCGT GGCCGCGGCG CTGGATGCCC ATACCACGCA CCCGATTGCC
CTGGCGATCG TGCAGGCCGC CGCCGCGCAC GGGGCGGCGC AGGCGCGTGG CGTCGATGAC
CTGTCCGTGC TGCCCGGCCG CGGCGTCGCG GGCACGCTCG ACGGCGTGCG CTGGCATCTG
GGCAACGCCG CGCTCGTCGC TGAACGCGGC TTCGATACGC CGGCCTGGCG TCAGGCCGCC
GAGCGGCTGC AGGCCGAGGG CATGTCGGCG GTCACGCTGT GCGATGCGGG CGGCGCGGTG
GCGCTCTTCG GCGTGCGTGA CCGCGAGCGC GCGGAAAGCG CCGAGGCCAT CGCCGGCCTG
CGTGCCCTGC ACGTGCAGCC GGTCATGCTG ACCGGCGACG ACCGCCGCGC CGCGCAGGCC
ATTGCCCGGG CAGTCGGCAT CGACGCCGTG CATGCCGAGC AGTTGCCGGC CGACAAGCAG
CGCGTGGTCG GCGAGCTGGC CGCGCAATAC GGTTTCGTCG GCATGGTCGG CGACGGCATC
AACGACGCGC CGGCCCTGGC CCGCGCCGAC ATCGGCTTCG CGATGGGCGC GGCCGGCACG
GCCACCGCCC TCGAGGCCGC CGACGTCGCC ATCATGGACG ACGACCCGCG CAAGCTGGGC
ACCTTCATCC GCATCAGCCG GCGCACCGTG GCCGTGCTGC GCCAGAACAT CGCGCTCGCG
CTGGGCATCA AGGCCGTCTT CCTCGCCCTG GCCGTGGCGG GCGAGGCGAC GCTGTGGATG
GCGATCTTCG CCGATGTGGG TGCGAGCCTG CTGGTGGTGT TCAACGGGCT GAGGGTGATG
CGCGCGCGTG CTTGA
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| Protein sequence | MTSHDHAHAK PAQTGCSGCC GHDQPAARDT AVRPAPAPAP HPGHDHAHDP QAAAAPADAA
ARARASGRTR LRIAQMDCPT EERMIRARLG NAEGVVALDF NLLERHLTIH HTVDDVTPFL
EALRAIGMDG EVLEAHDRAA AEPVAGPVGV SRRAWLLGLG GVAAFGAEAI AWSLGDHAWS
VLGLALASIA LAGGQTLRKG WIALRALAFN IHFLMAVAVI GALLIGKWAE AAMVIFLFAV
AEAIEARALV RARDAVRALT AIAPDTAEVA DGAGGWRAAA VESVAMGTRL RVRTGSRVPV
DARIVAGRAA LDESPVTGES LPVEKAIGDS ILAGTIVTDG VIEAEATAVA ADSTLARIAA
AIQEAQAQRA PTQRFVDKFA SLYTPAMMLL ALAVAVIGPQ VTADGWFAWT YRALVLLVIA
CPCALVISTP VTVVSGLAAA ARRGIVVKGG VYLESGRRLR ALALDKTGTL TAGRPVLDTV
ALPDGTRRAV TALNAATDAA QLRALGVAAA LDAHTTHPIA LAIVQAAAAH GAAQARGVDD
LSVLPGRGVA GTLDGVRWHL GNAALVAERG FDTPAWRQAA ERLQAEGMSA VTLCDAGGAV
ALFGVRDRER AESAEAIAGL RALHVQPVML TGDDRRAAQA IARAVGIDAV HAEQLPADKQ
RVVGELAAQY GFVGMVGDGI NDAPALARAD IGFAMGAAGT ATALEAADVA IMDDDPRKLG
TFIRISRRTV AVLRQNIALA LGIKAVFLAL AVAGEATLWM AIFADVGASL LVVFNGLRVM
RARA
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