Gene RS05401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS05401 
SymbolRSp0932 
ID1223239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1180282 
End bp1181016 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content63% 
IMG OID637240792 
Productamino-acid ATP-binding ABC transporter protein 
Protein accessionNP_522493 
Protein GI17549153 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGT TCTCCAATGT CTGCAAGTGG TACGGCGATT ACTGTGCGTT GAACAACATC 
AACGCAGAGG TCAAGAAGGG CGAGGTCGTC GTTGTCTGCG GGCCGTCGGG CTCGGGCAAG
TCCACGCTGA TCCGCACGGT CAACCGGCTG GAAGAGATCA AGTCCGGACA GATCCTGTTC
GACGGCGACG AGGTACACGC ACCGATGCGC AGCGATACGC TCAACAAAGT GCGCAGCCGC
ATTGGTTTTG TGTTCCAGAG CTTCAACCTG TTTCCGCATC TGTCGGTGCT GGAGAACATC
GTGCTGTCGC CGATGCGGGT GCGCGGGGTT CGCCGTGCCG AGGCGCGGGA GAAGGCCATG
CGACTGCTCG ATCGGGTGGG GCTGGCAAAC AAGGCCGACG CCTATCCCGC GCAGCTCTCC
GGCGGGCAGC AGCAGCGCGT GGCGATCGCA CGCGCCCTGG CCATGGAACC GCCCGCCATG
CTCTTCGACG AGCCTACCAG CGCGCTGGAC CCCGAGATGG TCGGCGAGGT GCTGGCCGTG
ATGCGCAGCC TGGCCAACGA GGGCATGACC ATGATGTGCG TGACCCACGA AATGAACTTC
GCACGCGAGG TTGCCGACCG GGTGTGGTTC ATGGACAGCG GCTCGATCCT GGAAGTGGCC
GAGCCCAATG TGTTCTTCCG CGAGCCGCAG CATCCGCGTG CCAAACGCTT CCTGTCGGAT
CTGCGCTCGC ATTGA
 
Protein sequence
MIKFSNVCKW YGDYCALNNI NAEVKKGEVV VVCGPSGSGK STLIRTVNRL EEIKSGQILF 
DGDEVHAPMR SDTLNKVRSR IGFVFQSFNL FPHLSVLENI VLSPMRVRGV RRAEAREKAM
RLLDRVGLAN KADAYPAQLS GGQQQRVAIA RALAMEPPAM LFDEPTSALD PEMVGEVLAV
MRSLANEGMT MMCVTHEMNF AREVADRVWF MDSGSILEVA EPNVFFREPQ HPRAKRFLSD
LRSH