Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS05401 |
Symbol | RSp0932 |
ID | 1223239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1180282 |
End bp | 1181016 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637240792 |
Product | amino-acid ATP-binding ABC transporter protein |
Protein accession | NP_522493 |
Protein GI | 17549153 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGT TCTCCAATGT CTGCAAGTGG TACGGCGATT ACTGTGCGTT GAACAACATC AACGCAGAGG TCAAGAAGGG CGAGGTCGTC GTTGTCTGCG GGCCGTCGGG CTCGGGCAAG TCCACGCTGA TCCGCACGGT CAACCGGCTG GAAGAGATCA AGTCCGGACA GATCCTGTTC GACGGCGACG AGGTACACGC ACCGATGCGC AGCGATACGC TCAACAAAGT GCGCAGCCGC ATTGGTTTTG TGTTCCAGAG CTTCAACCTG TTTCCGCATC TGTCGGTGCT GGAGAACATC GTGCTGTCGC CGATGCGGGT GCGCGGGGTT CGCCGTGCCG AGGCGCGGGA GAAGGCCATG CGACTGCTCG ATCGGGTGGG GCTGGCAAAC AAGGCCGACG CCTATCCCGC GCAGCTCTCC GGCGGGCAGC AGCAGCGCGT GGCGATCGCA CGCGCCCTGG CCATGGAACC GCCCGCCATG CTCTTCGACG AGCCTACCAG CGCGCTGGAC CCCGAGATGG TCGGCGAGGT GCTGGCCGTG ATGCGCAGCC TGGCCAACGA GGGCATGACC ATGATGTGCG TGACCCACGA AATGAACTTC GCACGCGAGG TTGCCGACCG GGTGTGGTTC ATGGACAGCG GCTCGATCCT GGAAGTGGCC GAGCCCAATG TGTTCTTCCG CGAGCCGCAG CATCCGCGTG CCAAACGCTT CCTGTCGGAT CTGCGCTCGC ATTGA
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Protein sequence | MIKFSNVCKW YGDYCALNNI NAEVKKGEVV VVCGPSGSGK STLIRTVNRL EEIKSGQILF DGDEVHAPMR SDTLNKVRSR IGFVFQSFNL FPHLSVLENI VLSPMRVRGV RRAEAREKAM RLLDRVGLAN KADAYPAQLS GGQQQRVAIA RALAMEPPAM LFDEPTSALD PEMVGEVLAV MRSLANEGMT MMCVTHEMNF AREVADRVWF MDSGSILEVA EPNVFFREPQ HPRAKRFLSD LRSH
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