| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05328 |
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| Symbol | RSp1283 |
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| ID | 1223595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1630714 |
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| End bp | 1631958 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637241146 |
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| Product | porin transmembrane protein |
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| Protein accession | NP_522842 |
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| Protein GI | 17549502 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4580] Maltoporin (phage lambda and maltose receptor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.245127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAAGA CGACGATCAG CACACTGATC GCAGTGATCC CGGCGTGGCT GGCCACGGAG
GCCTGGGCCG TGAACCTGGG CGAGGGCCTG GAGTTCAACG GCTACCTGCG CATGGGCGTG
GTGTCGGAGC GGCAGACCGA CGCCGGCGGT GTCAACAAGT ACGCGCTCGG CAGCGGCGCG
GAGCTGTTCC GGCTCGGCAA CGAGGGCGAT ACCTACCTCG AGGCCAGCCT GAAGAAGGTC
TTCCAGCTGC CGGGCGGGAT CACCTGGGCC GCCGCGTTCA CCGGCACCTA CTGGAACGGC
CTGGCCAACT TCCGCGGCAC GGGTGACCAG GGCATGTACG TGACCAAGGA AGCGTACGTG
ACCACCAGCG GCTATGCCTT CTCGCCCGCA GCCATCTTCT GGGCGGGCAA GCGCTACATC
GAGCGCGAAG ACGTGCACAT CGTCGACCAC TTCTTCTACA GCGTGGGCGG CCCGACCATC
GACACGGGCG TCGGCGCCAC CAACATCCCG GTCGGCGAGC AGGCCCGGCT GGGGATCAGC
GTGCTGCGCA GCGGCCAGCG CTTCAGCCCC ACCGACAACC GGCGGGATGC GACGCGCCTG
AATGTCGACC TCTACAACAT CCCGGTCACG CGCACCGACA GGCTGCGCGT CATCGGCGAA
GTGATGCACG GCGAGTTTCC GGGCGGCAAC GGCGGCGGCG CGCTGACGTT CAAGTACGAC
TCGCCCAACT TCCCGCTGCC GTCCGTGACC AATTCCGTCT GGGTGCAGGG CAGCACGGGC
TATGCCTCGC TGGAGACCGG TTTCGGCACG CTCAACAGCC CGACCGGCAC CAACAGCGTT
CGCCTGATCG ATTCCGTGAA CTGGCAGGTC GGCCGGTTCG GCGGCCAGGC GCTGGCGGTC
TACCAGCGCG GGCTGAACGA GCACGGCAGC GGCGGCAGCA CCGGCACCTC GGTCGGCGGG
CGCGTTTCGT ATGCGGTGAC GCCTTATCTC AAGCTGCTGT CCGAGGTCGG CCTGACGACA
CTGCGGGTCA ATGGCGGTCC GCTGCAGCGC CTCGACAAGT ACACCGTGGC GGCGGCGCTG
AGCTCCGGGC CCGGGCTGCT GAGCCGGCCG GAGTTGCGGA TCTACGCCAC CCGGGTCGCG
TGGAACGACG CGGCGCTGGC GGCCCAGGGC GCGCAATGGG GGGCGTGGTC GGCGGGGCGC
CGCTCCACCA ATCTGTACGG CATCCAGCTG GAGAGCTGGT GGTGA
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| Protein sequence | MKKTTISTLI AVIPAWLATE AWAVNLGEGL EFNGYLRMGV VSERQTDAGG VNKYALGSGA
ELFRLGNEGD TYLEASLKKV FQLPGGITWA AAFTGTYWNG LANFRGTGDQ GMYVTKEAYV
TTSGYAFSPA AIFWAGKRYI EREDVHIVDH FFYSVGGPTI DTGVGATNIP VGEQARLGIS
VLRSGQRFSP TDNRRDATRL NVDLYNIPVT RTDRLRVIGE VMHGEFPGGN GGGALTFKYD
SPNFPLPSVT NSVWVQGSTG YASLETGFGT LNSPTGTNSV RLIDSVNWQV GRFGGQALAV
YQRGLNEHGS GGSTGTSVGG RVSYAVTPYL KLLSEVGLTT LRVNGGPLQR LDKYTVAAAL
SSGPGLLSRP ELRIYATRVA WNDAALAAQG AQWGAWSAGR RSTNLYGIQL ESWW
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