| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS04686 |
|---|
| Symbol | RSp0174 |
|---|
| ID | 1222577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | + |
|---|
| Start bp | 215041 |
|---|
| End bp | 215865 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637240033 |
|---|
| Product | methyltransferase protein |
|---|
| Protein accession | NP_521735 |
|---|
| Protein GI | 17548395 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGC AAATGCCCAT CGCGAGTCCG CGCACGGAAT TCTACGAGCG CGCCTTCGGC
GGTTTCCATG ACCAGGCCGT GGCCGAGGTA CGCAAAGAGA CCTACGGCGA AGATCTGGGA
CAGAACGACT GGTCCACCGT GGATGAGATG CGGCAGTTCT CGCAGTGGCT GGAGTTGTCC
CCGCAGTCGC ATCTGCTCGA CGTGTGCAGC GGCTCCGGCG GGCCGGCCCT GTTTCTCGCG
CGAAACAGCG GTTGCCGTGT GACCGGCGTC GATCTCCACC CCGACGCCCT GCAGACCGGG
CGGCAGCTCG CACAGGCGCT GGAGTTGCAC GACCGGAGCC AGTTCGTCGA ATGCGATGTC
CGCCAGCGCA TGCCCTTTCC CGACGGCACG TTCGATGCGC TGTGGTGCAT CGATTCCGTC
ATCCATATCC CGGATCGCCT GGCGCTGCTG CGCGAATGGT GCCGCCTGCT GAAGCCCGGT
GGGCGGTTCC TGTACACCGA TCCCACCCTC GTCACGGGCA TGGTCAGCAA GGAGGAGATC
CTGTTGCGCG GCACGCCGGG CTATTTCCTG TACACGCCGA TCGGGCTCAA TGAACGGCTG
ATCGAGCAAG CGGGTCTGCG CCTGGATATG CAGGCCGACC TCACGCACAG CATCACGGAA
CTCAGCGAAC GCTGGCACGC CGCCCGGGAG AAACGCTGTG CGGTGCTGAC GGCCACGGAG
GGGGAGGAAG CCTTCGCGCG CATGCAGAGC TTCCTGACCG CGACCCACCG GGTTTCCGTC
GAGGGCAGGT TGTCGCGCTG GGTTTTTGTC GGCGTGCGTC CCTGA
|
|---|
| Protein sequence | MTTQMPIASP RTEFYERAFG GFHDQAVAEV RKETYGEDLG QNDWSTVDEM RQFSQWLELS
PQSHLLDVCS GSGGPALFLA RNSGCRVTGV DLHPDALQTG RQLAQALELH DRSQFVECDV
RQRMPFPDGT FDALWCIDSV IHIPDRLALL REWCRLLKPG GRFLYTDPTL VTGMVSKEEI
LLRGTPGYFL YTPIGLNERL IEQAGLRLDM QADLTHSITE LSERWHAARE KRCAVLTATE
GEEAFARMQS FLTATHRVSV EGRLSRWVFV GVRP
|
|---|
| |