| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03880 |
|---|
| Symbol | RSp0599 |
|---|
| ID | 1222906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | - |
|---|
| Start bp | 732068 |
|---|
| End bp | 732712 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637240459 |
|---|
| Product | putative transcription regulator protein |
|---|
| Protein accession | NP_522160 |
|---|
| Protein GI | 17548820 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.778917 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.557481 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGC AGCACGCCCG TCCGCCCGCG CGGACCACCT ACCGGCACGG CGACCTGCGC
CGCGCGCTGC TCGATGCCGG CATTGCCCTG GCGCGGGCCG GCGGCCCCGA TGCGATCGTA
CTGCGCGAAG CCACGCGGCG CGCCGGCGTG GTACCGAATG CCGCCTACCG GCACTTTGCC
GGGCGCCACG ACCTGCTGCA GGCGGTGCGC GCCTCGGCCC TCGCGGCACT GGCCCGCGCG
ATGGAGGCCG AACTGGCGCG GATCGACCCC GCCCAGCCCG AAGCCGAGCA GGCGCGCGCG
GCGCTGCGCG CGGTCGGCGT GGGCTATCTG CGCTTTGCGC AACAGGAGAC CGGCCTGTTC
CGCACCGCAT TTGCCGTGCC CGACGAAGTC GAGCACGACG CGGATCCGGA CAAGGCCGGC
GACAGTGGAC TCAATCCGTT CCAGTTGCTG GGCGCCGCGC TCGATCGCAT GACGGCGGCC
GGCGTCCTGC CCGCCGAGCG CCGCCCGGGG GCCGAATACC TGGCCTGGTC CGCCGTGCAC
GGCCTGGCGC TGCTGATCAT CGACGGACCG CTGCGCGGCC GGCCGCCGGA GCAGACCGGC
GCCATCGCCC TGCGCGTGGT GGAAATGGTG GAGAACGGCC TATAG
|
|---|
| Protein sequence | MTQQHARPPA RTTYRHGDLR RALLDAGIAL ARAGGPDAIV LREATRRAGV VPNAAYRHFA
GRHDLLQAVR ASALAALARA MEAELARIDP AQPEAEQARA ALRAVGVGYL RFAQQETGLF
RTAFAVPDEV EHDADPDKAG DSGLNPFQLL GAALDRMTAA GVLPAERRPG AEYLAWSAVH
GLALLIIDGP LRGRPPEQTG AIALRVVEMV ENGL
|
|---|
| |