| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03167 |
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| Symbol | RSp1223 |
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| ID | 1223535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1556489 |
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| End bp | 1557814 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637241088 |
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| Product | high affinity nitrate transporter transmembrane protein |
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| Protein accession | NP_522784 |
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| Protein GI | 17549444 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0455784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCA AAGCCACCCG AATCGACCTG TTCAGCTTGC GCACGCCGCA GATGCGCGCC
TTCCACCTCA CGTGGCTGGC ATTCTTCGTG TGCTTCTACG CGTGGTTCGC CTGCGCGCCG
CTGATGCCGG TGCTCAAGGG CGAGTTCCAC CTCACGCCCG GGCAGATCGC CAATATCAAT
ATTGCCGCGG TGGCCGTGAC GATCCTGGTG CGGCTGATCG TCGGGCCGCT GTGCGACCGC
TTCGGTCCGC GCAAGACCTA CACGGGCCTG CTGGTGCTGG GCGCCGTGCC CGTGCTGGGC
GTCGCGCTGG CGCAGAGCTA CGAGGCCTTC CTGTTCTTCC GCCTGGCCAT CGGCGCCATC
GGCGCGAGCT TCGTCATCAC GCAGTACCAC ACCTCGGTGA TGTTCGCGCC CAACGTGGTG
GGCACCGCCA ATGCGGCCGC GGCCGGCTGG GGCAACGCGG GCGGCGGCGT GGCGCAGGGC
ACGATGCCGC TGCTGCTGAC CGCCATCGTC ATGCTGGGCG TGACGCAGGG CATGGGCTGG
CGCCTCGCCA TGGTGGTGCC GGGCGTGGCC ATGCTGATCG TCGCGGTGCT GTACTGGCGC
TATACGCAGG ACTGCCCCGA AGGCAACTTC GACGACCTGC GCGCCGCCGG CAAGACCATC
GAGGGCGGCA AGAAGGGCGG CTGGGGCAGC TTCGTCACGG CGGCCGGCAA CTACCGCGTG
TGGCTGCTGT TCGTCACCTA CGGCGCGTGC TTCGGCGTGG AGATCTTCAT CCACAACATC
GCCGCCATCT ACTACGTCGA TCACTTCGGC CTGTCGCTGT CGGCCGCCGG CATGGCCGCC
GCCAGCTTCG GCCTGCTGGC ACTGTTCGCC CGCGCGCTGG GCGGCATCGT GTCGGACCGC
GTGGCGCGCA GCCGCGGCCT GGATGCGCGT ACCCTGCTGC TGTGCGTGCT GATGGTGGGC
GAGGGCCTGG GCCTGCTGGG CTTCGCGCAT GCCGGCACCG CATCGCTGGC GGTGCTGGCC
ATGCTGGGCT TCGGCCTGTT CACGCACATG GCCTGCGGCG CCACGTATGC GCTGGTGCCG
TTCATCGATC GCCGCGCCCT GGGCGGCGTG GCCGGCATCA TCGGCGCGGG CGGCAACGTG
GGCGCGGTGG CGGCCGGCTT CCTGATGAAG GGGCTGGGCG ACGCGCAGCA GACGCTGTCA
GTGCTGGGCG TGATGGTGAT GCTGTCCGCC ATCTGCGCCG TCGCGGTGCG CTTCTCGGCA
GAACACAAGG CGCGCGAACA AGCGCTGTAT GACAACACCC TGGCAGCCGG CGCTGCCAAC
GTCTAA
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| Protein sequence | MTGKATRIDL FSLRTPQMRA FHLTWLAFFV CFYAWFACAP LMPVLKGEFH LTPGQIANIN
IAAVAVTILV RLIVGPLCDR FGPRKTYTGL LVLGAVPVLG VALAQSYEAF LFFRLAIGAI
GASFVITQYH TSVMFAPNVV GTANAAAAGW GNAGGGVAQG TMPLLLTAIV MLGVTQGMGW
RLAMVVPGVA MLIVAVLYWR YTQDCPEGNF DDLRAAGKTI EGGKKGGWGS FVTAAGNYRV
WLLFVTYGAC FGVEIFIHNI AAIYYVDHFG LSLSAAGMAA ASFGLLALFA RALGGIVSDR
VARSRGLDAR TLLLCVLMVG EGLGLLGFAH AGTASLAVLA MLGFGLFTHM ACGATYALVP
FIDRRALGGV AGIIGAGGNV GAVAAGFLMK GLGDAQQTLS VLGVMVMLSA ICAVAVRFSA
EHKAREQALY DNTLAAGAAN V
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