| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03082 |
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| Symbol | RSp1462 |
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| ID | 1223774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1839989 |
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| End bp | 1841467 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637241325 |
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| Product | hypothetical protein |
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| Protein accession | NP_523021 |
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| Protein GI | 17549681 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.208658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.984334 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCCG CGCCGCCGGC CATCGCGGCC GAAGCCTTGC CGGCGCATCC GCCGACGGCA
TTGCGGCTGA GCCTCCAGGA GGCCTTGCAA GGCGCGTTGA CACGCGCCGT CAGCGTCCAG
ACCCAGCAGC TGGACTTGCA GCAGCAACAG GAGCAGACCG AACAGGCCCG TCACGAATTC
CTGCCGCAGA CCGTCCTGTC GAGCCAGCTC GAGCGCAACA GCACTTCCGG CACCGGCACG
GGCACCACGC GCGGCACGGC CAGCTCGGGG AACCTGGTTT CCACGTGGAA ACTGCGCTCG
GGCACGCAGT TGTCCCTGTC GGAGGGGCGC CTGTACAACC GGTTCGGGCA GAGCGCGCCG
GCGGACAGCT TCGTCCCGGG GGCCAGCCTG AACACCAGCA GCCGCGTCAC GTCGGTCTCG
CTGTCGCAGC CGCTCCTGCG CGGCTCGGGC AGCGACGTGG TGCTGCTCAA CGAACGCCGG
GCCGCCCTCG CGCTGGAGAG CGCGCGCCGG AGCTTCCTGC AAACCCAGCG CGACGTGGTG
CTGAACGGCG TGCTGGCGTA TTTCGCGCTG GAGCAGGCCA GGCAGAATGT CACGCTCGCG
CAGGCGGCGC TGCAGCGCGC GGGCGAGGCC CGATCGATCA ACGAAGCGCT GCTCGCCGCC
GGACGCATCG CCCGCATCGC CCTGCTGCAG AGCGACGCCG ACCTGGCGCA GGCCGAGCTG
GCGCTGACGC AGTCCCGGCA GGCCGAGAAC GTCGCCCGCC GCCAGCTGCT GCGCGTGATC
GGCCGATACG ACCTGGATGC CGACCGCACC GACATCACGC TCACCGATTC CTTTACCGCC
TATCTGCCGC CGGCCGCGCA GAACGAGGCG CCGATCATGC GGGACGCGCT GGCCAGGCGG
GTGGACCTGC AGCTCGCGAG AGACGCCGTG ACCGCGAGCC AGTTCAGCGT GACCGCCGCG
CAGGACGGCA TGCGCAACCA GCTCGATCTG TACGCGCGGC TCGACCGGTC GGGCGACAGC
GCCGGCGGCA CCTCGAACCG GCAGATCAAC CGCGCGGTCG GCCTGAGCTT TTCCATGCCG
CTGGACAAAT CCGAGAGCCG CCTGGCGCTG GGCGCCGCAC GGGTCGCGCT GACGAAGGCC
GAACTGTCGC TGGCCGATCT GGAGCGCACC GCGCGTGCCG AAGTCAGCGA CGCACTGAGG
AACATCGACT TCGCCTTCCT CCAGCACCGG ATGGCCCAGC GCACGGCGGA GCTCGCGCGG
CAGCGGCTGG CGGGCGAGAT CGAGAAAGCG CGCGCCGGCC GCAGCAGCGC GACCGACCTG
TCGCTGGCCC AGGACACGCT CAACCAGGCG CTGTCCCAGG AGGTGCAGGC GCGCTTTGCC
ATCTTCACCG CGCAGCTCGA GCTGCAGCGG GTCAGCGGCA CCGCGCTGGA GCAATGGCAC
GTGGCGGCGT TCGCCCAGGC AACCCTGCCC CCTTCATGA
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| Protein sequence | MLAAPPAIAA EALPAHPPTA LRLSLQEALQ GALTRAVSVQ TQQLDLQQQQ EQTEQARHEF
LPQTVLSSQL ERNSTSGTGT GTTRGTASSG NLVSTWKLRS GTQLSLSEGR LYNRFGQSAP
ADSFVPGASL NTSSRVTSVS LSQPLLRGSG SDVVLLNERR AALALESARR SFLQTQRDVV
LNGVLAYFAL EQARQNVTLA QAALQRAGEA RSINEALLAA GRIARIALLQ SDADLAQAEL
ALTQSRQAEN VARRQLLRVI GRYDLDADRT DITLTDSFTA YLPPAAQNEA PIMRDALARR
VDLQLARDAV TASQFSVTAA QDGMRNQLDL YARLDRSGDS AGGTSNRQIN RAVGLSFSMP
LDKSESRLAL GAARVALTKA ELSLADLERT ARAEVSDALR NIDFAFLQHR MAQRTAELAR
QRLAGEIEKA RAGRSSATDL SLAQDTLNQA LSQEVQARFA IFTAQLELQR VSGTALEQWH
VAAFAQATLP PS
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