| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03081 |
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| Symbol | RSp1463 |
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| ID | 1223775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1841582 |
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| End bp | 1842835 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637241326 |
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| Product | ABC transporter ATP-binding protein |
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| Protein accession | NP_523022 |
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| Protein GI | 17549682 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.543413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.955285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCGGC CCGCCGTGCA GGAGCGCGGC CATTGGCTCA AGGCTGCGCG CCAGGCGTCG
TCGCAGCCGC TGCTGCTGCA GGGCACGCTG CGCCCGGTCG ATGCCGTCAA TATCGCGGCG
CCGGTCGAGG GCGTGCTGCT CGCGAAGTTC GTGCAGTTCG GCGACACGGT GACGGCCGGG
CAGAAGCTCG CGCAGGTCAG CGACACCGAG CTCAAGCGCC AGTTGCGCGA GGCCGAGATC
GCCTCGATCC AGGCGCAGCA GGCGCTCAGC GCGGCACAGC AGATCGAGTC CAGCACGGAA
TACCAGGCCG CGGCGCGCCG GCTGCTGGCC GCGCAGAACA GCCTGGCGGC CGCGCAGCGG
CGCGGCAAGG AAGCGCAGAT GCTCTACGAC AAGGGCATCA TCGCCCGCAC GGAACTGGAT
GCCGGCAAGC AGGAGATCGA TACCGGCCAG AGCCAGGTGG ACGGCGCGCG CGACGAAATC
GCCACGCTCA GGCTCAAGCG CGCCCCGGCG GCCCTGCGCG TGCTCGAACT GGATCTCGAA
AACCGGCAGC TGCGCCTCGA AGAACTCCGC GCCAAGCTCA AGGCGACGAC CCTGCTGTCG
CCGATCTCGG GCGTGGTGCT GTACCCCGAG CCGACCGACG GCAACGACCC GTCCGGCCGC
AAGGAGCTGA ACGCGGGCGC TGCCGTCACG CCCAAGGACG TCATCCTGAC CGTGGGCGAC
ACCTCGGCGT TTCTCATCAA AGCCTGGGTG GACGAGGAGG ACATCCGCCG CGTGGCGCCG
GGACAGGCCG TGCGCATCGT GCTGGGCGCG GACAGCGACC GGGCGTTCGC GGGCACCGTG
CAGCGGGTCT CGTCGCAAGC CAGAGCGGCG GACGGGCGCG GACAGGGCAG CCGCGGCACG
GCGGAATTCG AAATGCAGAT CCTGTTCAAG CCACCCACCG ATGCGGGCAG GTCGCTGCGC
GTCGGCAGCG CCGTCAACAT GAGCCTGGCG CCGGAGCCGG GGCCGACCAC GCTGCGCATC
CCCCTGGCGG CGGTGGCCTG GAGCCCGGCG GGCCGGCCGG TGGTGCGCGT GCGCAAATCG
GCCTCGGACA CGGCGCGCAT GCAGGAGATC GAAGCCGGCC GGACCCTCGT CGACAGCGTC
GAGGTCAAGG CCGGCATCGC GGATGGCGAC GAGGTGTGGG TGCCCAGCGC AGCCGCCGGC
CCCGGCGACG AGGGCACGCT GAAGCAACTG CTGTCGGGGG TCGGCAATGG CTGA
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| Protein sequence | MARPAVQERG HWLKAARQAS SQPLLLQGTL RPVDAVNIAA PVEGVLLAKF VQFGDTVTAG
QKLAQVSDTE LKRQLREAEI ASIQAQQALS AAQQIESSTE YQAAARRLLA AQNSLAAAQR
RGKEAQMLYD KGIIARTELD AGKQEIDTGQ SQVDGARDEI ATLRLKRAPA ALRVLELDLE
NRQLRLEELR AKLKATTLLS PISGVVLYPE PTDGNDPSGR KELNAGAAVT PKDVILTVGD
TSAFLIKAWV DEEDIRRVAP GQAVRIVLGA DSDRAFAGTV QRVSSQARAA DGRGQGSRGT
AEFEMQILFK PPTDAGRSLR VGSAVNMSLA PEPGPTTLRI PLAAVAWSPA GRPVVRVRKS
ASDTARMQEI EAGRTLVDSV EVKAGIADGD EVWVPSAAAG PGDEGTLKQL LSGVGNG
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