| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03057 |
|---|
| Symbol | RSp1486 |
|---|
| ID | 1223798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | - |
|---|
| Start bp | 1865479 |
|---|
| End bp | 1866828 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637241349 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_523045 |
|---|
| Protein GI | 17549705 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0439] Biotin carboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.450613 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA AGATTCTGTA CGTCTATGCG CCGGCCGGCC CGCCGCTGGA CTACTGTTTC
CCGAAAATCG CCGCGCGCGG GGAAGTCCAT ACCTGTATCG TCAGCCCGCC GTCGGCCTCC
AACATGGAGA TCCTGCGCCG GCACAGCCGT GCCGTGCATG ACTTCAGCCA TGTCGCCCCG
GCGCAGGCGC TGGAGCAGGT GCGCGCCCTG GCGCAGCAGA TCGGCCCGGA TGCGATCTTC
ACATTCTCCG AGTTCCTGCT GAAATCGGTC TCGGAACTGG CGGCCGAGTT CGGGCTGCGC
GCGGTCGGCC CCAATATCGC GCTCGGGCGC AACAAGGTAC TGATGCGCGA ACGCTGGCAC
CAGGCCGGCA TCCCGCAGCC GGCATTTCGT GCGGTCCGCA GCGAGCAGGA AATCTCGCGC
GTGGCCGAGC TGAACTTTCC GGTGCTGGTC AAGCTGGCCT ACGGCGCCGG CTCGATCGGC
CAGCAGATCG TGAACGGCAT GGATGAGTTG CCGGCGGCAA TCGAGCGCCT GATTGCCGCC
ACGGAGGCGG CACGCAGGGC GGGCAAGCAC GAGTTTTCCG AACACGAGGG CTTTCCGCAG
CTGATCGCCG AAGAGATCAT TCAGTCCACC ACCACCTCGT GGTACGACGA AGACGGCTAC
GGCGACTACC TGAGCGTGGA AGGGCTGGTG CGCGACGGTG TGTACTACCC GTTGGCCATG
ACCGGCCGGC TGCGCACCAT TGCGCCGTTT ACCGAACTCG GCAATGTGGC GCCGTGCGTG
CTGAGCACGG ACAAGAAGGC AAAGATCGTT GCGCTGATCA AGCGGTCGAT CGATGCGCTT
GGCTTCGAGA ACTGCGCCAC CCACACCGAG CTCAAGCTGA TGGCGGACGG CGAGGTGTCG
TTCCTGGAGA CCGCCGCCCG CATGGGCGGC GTGGCGATCG CCAAGGAGCT GGACGAAGTA
TTCGGGATCG ATTATGTCGA TCTGTTTCTG AGCGTGATCC TGGGCGAGCC GGAGACGATT
CCGGCATTCG AGCAGAACGC GCCGCGCTGT GCCGCGGCTT CGGTGGCACT GATCGCCTGC
GACAGTCGCG GCACGCCGTG GCAGAGCACG CGCGGTTTTG CGCCGGAGCG CGTGAACTGG
GGCGAATTGC TGGACGACAT GGCCGAAGTG CATATCCAGT ATGCGCAGTC GATCGTGCCG
GGCAGCCCGA TCGCTCCCTA CGACATTTCC GGAGGGTTGA TGAACTACGC CGGCCAGGCA
TTCCTGGTAA GCCCGACGCC GGCCGAGCTC AAGCGTGCTG CGTACCAGTT GCTGGACGGC
CTGGAGCAGC GTTTGCCGCT GCATAGCTGA
|
|---|
| Protein sequence | MSKKILYVYA PAGPPLDYCF PKIAARGEVH TCIVSPPSAS NMEILRRHSR AVHDFSHVAP
AQALEQVRAL AQQIGPDAIF TFSEFLLKSV SELAAEFGLR AVGPNIALGR NKVLMRERWH
QAGIPQPAFR AVRSEQEISR VAELNFPVLV KLAYGAGSIG QQIVNGMDEL PAAIERLIAA
TEAARRAGKH EFSEHEGFPQ LIAEEIIQST TTSWYDEDGY GDYLSVEGLV RDGVYYPLAM
TGRLRTIAPF TELGNVAPCV LSTDKKAKIV ALIKRSIDAL GFENCATHTE LKLMADGEVS
FLETAARMGG VAIAKELDEV FGIDYVDLFL SVILGEPETI PAFEQNAPRC AAASVALIAC
DSRGTPWQST RGFAPERVNW GELLDDMAEV HIQYAQSIVP GSPIAPYDIS GGLMNYAGQA
FLVSPTPAEL KRAAYQLLDG LEQRLPLHS
|
|---|
| |