Gene RS03011 details

Gene Information

• Locus tag: RS03011
• Symbol: RSp0111
• ID: 1222514
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003296
• Strand: +
• Start bp: 126417
• End bp: 128462
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 637239970
• Product: hypothetical protein
• Protein accession: NP_521672
• Protein GI: 17548332
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1305] Transglutaminase-like enzymes, putative cysteine proteases

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACGCCG CCTTCGGTTC CGCACGCGCG CTCACACACC GCGAGCACGG CCGGCTGATC 
GCGCTGCTGG CCCTGGTACT GGCGCCGCTG CTGCGCAGCC TGCCGCTGGT GACCTGCAGC 
GTGTTCGGCG TGCTGCTGCT CTGGCGGACC GGGCTGTGGG TCCGCCGCGC GCCGCTGCCC 
AACAAATGGC TGCTCGGGGT GACCGGCGCG GCGGTGCTGG GCATCACGCT GGTGCTGGCG 
CTGCGCACCG GCGGCAACAT CGGCCGCGAC CTGTCGGTGG CGGTGCTGGG GGCCTTCCTG 
GTGCTCAAGC TGATGGAGTC GCACACCGTG CGCAACGGCA TCCTGGTCAC GCAACTGTGC 
TGCTTCCTGC TGCTGTCGCA GACGCTGTTC GACCAGCCGC CCTGGATGGC GGCCACGCTG 
CTGGCGTCCG TCGGGCTGCT GCTCCATCAC TGGATGGTGC TGCTGCATCC GCAGGCGCCC 
GCCCGGCTGT CCGTGGCGGG GGTGCTGCTG CGGCTGGTCA TGACGGGCCT GCCGTGCGCG 
GCCGTGCTGT TCCTGCTGTT TCCGCGTCTG GACCATCCGC TGTGGCGCTT GCCGCAAGGC 
GCGGACGTTG CCACCAGCGG GCTCACCGAC CGCATGGCGC CCGGCTCGAT CGGCCAGCTG 
ATCCTGTCGG ACGATCTCGC CTTCCGCGCC GACTTCAACG GCGTGCCGCC GCCGTCCGGG 
GCGCGCTACT GGCGCGGCAT CGTGCTGTGG CGATTTGATG GTCAGGCTTG GACGGCATCG 
TCGTTCCGGC AGCGCGCCGA GCCCGCGAGC GTACCCAATT CTGCGGGCGT ATCCGATTCT 
GCGGGCGTAC CCGATTCTGC GAACGCGCGG CCCGGTGCCG GCCGGCTCGT CGACTACAGC 
ATCACGCTCG AACCGACCCG CCAGCGCTGG CTCTTCGCGC TGGATCGCGG CGTCTCGATC 
GACGCGCGGG ACGGCCTCAG GCGCAGCATC GACGCGGAGT TCCTGAGCGC GCATCCGCTG 
GACGAGCGCA TCCGCTATCA CGCGCGTTCA CGCCTGCCGG GGCCGGGCAC GGGCGACGAG 
GAGGCGCTCG ACCCATTGAC GCAGCAGTTG GCGCTGGCGC TGCCGCCGGG CAACCCGCAG 
GCGCGTGCGC TGGCCGCGCA GTGGGCCGGC CTCGCTCCGG CCGAGCGGGT GGCCTCGGCG 
CTGAAGCTGT TCCGCGACGC GCCGTTCGCC TACACGCTCG AGCCCGAGCC GCTGCGGGGT 
GAGCAGATCG ACGACTTTCT CTTCCGCACC CGCCGCGGCT TCTGCGAGCA CTACGCGGGC 
AGCTTCGTCT TCCTGATGCG GGCGGCGGGC GTGCCGGCGC GCGTGGTGGT CGGCTACCAG 
GGCGGCGAGG ACAACGCGGT CAGCGGCGAC CTCATCGTGC GCCAGTCGGA CGCGCACGCC 
TGGGCCGAGG TGTGGCTGCG CGGGCGCGGC TGGGTGCGGG TGGACCCCAC CGCCGCCGTG 
GCGCCGCAGC GCGTGGAGCG CGGCCTGGCC GGCGCCGTGC CCGCCAGCGA ATTCCGCTCG 
CGCCGCGTGC AGGAGCCTGC CTGGCTGCGC AGCGTGCGCT GGGGCCTGGA CGGCCTGATC 
AGCGGCTGGA ACCGCTGGGT GCTGGGCTAC GACCGCGCCC GGCAGGCCAG GCTGTTCGCC 
TGGCTGGGGC TGGAGGCGGC CGATCCGCGC GCGGTGCTGT GGGGGGTGTC GGCGCTGTTC 
CTGCTGGCGG CGCTGCCGCT GCTGTGGCAG CAGCGGCGCC CCAGGCCTGA CCCGGTGCAG 
GCGCAATGGC AGCGCGTATG CGACCGGCTG GCACGCCACG GCTGCGTGCG CGGCGCGGCG 
GAAGGGCCGA TGGCCTACGC GGAGCGTGCC GCCGCCCGGT TTCCGCAGGC GGCCGACGCA 
CTGCGGCGCG TCGCCGCCGG CTATGTCGCG CTGCGCTATG GCCGCGACGA CGGCGACGCG 
CAGGCGAGAG CGCAGCGGCT GGCGCAATGG CGCAAGGACA TCGCCGCCCT GCGCGTGCCG 
GGATAG 

 

Protein sequence

MNAAFGSARA LTHREHGRLI ALLALVLAPL LRSLPLVTCS VFGVLLLWRT GLWVRRAPLP 
NKWLLGVTGA AVLGITLVLA LRTGGNIGRD LSVAVLGAFL VLKLMESHTV RNGILVTQLC 
CFLLLSQTLF DQPPWMAATL LASVGLLLHH WMVLLHPQAP ARLSVAGVLL RLVMTGLPCA 
AVLFLLFPRL DHPLWRLPQG ADVATSGLTD RMAPGSIGQL ILSDDLAFRA DFNGVPPPSG 
ARYWRGIVLW RFDGQAWTAS SFRQRAEPAS VPNSAGVSDS AGVPDSANAR PGAGRLVDYS 
ITLEPTRQRW LFALDRGVSI DARDGLRRSI DAEFLSAHPL DERIRYHARS RLPGPGTGDE 
EALDPLTQQL ALALPPGNPQ ARALAAQWAG LAPAERVASA LKLFRDAPFA YTLEPEPLRG 
EQIDDFLFRT RRGFCEHYAG SFVFLMRAAG VPARVVVGYQ GGEDNAVSGD LIVRQSDAHA 
WAEVWLRGRG WVRVDPTAAV APQRVERGLA GAVPASEFRS RRVQEPAWLR SVRWGLDGLI 
SGWNRWVLGY DRARQARLFA WLGLEAADPR AVLWGVSALF LLAALPLLWQ QRRPRPDPVQ 
AQWQRVCDRL ARHGCVRGAA EGPMAYAERA AARFPQAADA LRRVAAGYVA LRYGRDDGDA 
QARAQRLAQW RKDIAALRVP G