Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03011 |
Symbol | RSp0111 |
ID | 1222514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 126417 |
End bp | 128462 |
Gene Length | 2046 bp |
Protein Length | 681 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637239970 |
Product | hypothetical protein |
Protein accession | NP_521672 |
Protein GI | 17548332 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCG CCTTCGGTTC CGCACGCGCG CTCACACACC GCGAGCACGG CCGGCTGATC GCGCTGCTGG CCCTGGTACT GGCGCCGCTG CTGCGCAGCC TGCCGCTGGT GACCTGCAGC GTGTTCGGCG TGCTGCTGCT CTGGCGGACC GGGCTGTGGG TCCGCCGCGC GCCGCTGCCC AACAAATGGC TGCTCGGGGT GACCGGCGCG GCGGTGCTGG GCATCACGCT GGTGCTGGCG CTGCGCACCG GCGGCAACAT CGGCCGCGAC CTGTCGGTGG CGGTGCTGGG GGCCTTCCTG GTGCTCAAGC TGATGGAGTC GCACACCGTG CGCAACGGCA TCCTGGTCAC GCAACTGTGC TGCTTCCTGC TGCTGTCGCA GACGCTGTTC GACCAGCCGC CCTGGATGGC GGCCACGCTG CTGGCGTCCG TCGGGCTGCT GCTCCATCAC TGGATGGTGC TGCTGCATCC GCAGGCGCCC GCCCGGCTGT CCGTGGCGGG GGTGCTGCTG CGGCTGGTCA TGACGGGCCT GCCGTGCGCG GCCGTGCTGT TCCTGCTGTT TCCGCGTCTG GACCATCCGC TGTGGCGCTT GCCGCAAGGC GCGGACGTTG CCACCAGCGG GCTCACCGAC CGCATGGCGC CCGGCTCGAT CGGCCAGCTG ATCCTGTCGG ACGATCTCGC CTTCCGCGCC GACTTCAACG GCGTGCCGCC GCCGTCCGGG GCGCGCTACT GGCGCGGCAT CGTGCTGTGG CGATTTGATG GTCAGGCTTG GACGGCATCG TCGTTCCGGC AGCGCGCCGA GCCCGCGAGC GTACCCAATT CTGCGGGCGT ATCCGATTCT GCGGGCGTAC CCGATTCTGC GAACGCGCGG CCCGGTGCCG GCCGGCTCGT CGACTACAGC ATCACGCTCG AACCGACCCG CCAGCGCTGG CTCTTCGCGC TGGATCGCGG CGTCTCGATC GACGCGCGGG ACGGCCTCAG GCGCAGCATC GACGCGGAGT TCCTGAGCGC GCATCCGCTG GACGAGCGCA TCCGCTATCA CGCGCGTTCA CGCCTGCCGG GGCCGGGCAC GGGCGACGAG GAGGCGCTCG ACCCATTGAC GCAGCAGTTG GCGCTGGCGC TGCCGCCGGG CAACCCGCAG GCGCGTGCGC TGGCCGCGCA GTGGGCCGGC CTCGCTCCGG CCGAGCGGGT GGCCTCGGCG CTGAAGCTGT TCCGCGACGC GCCGTTCGCC TACACGCTCG AGCCCGAGCC GCTGCGGGGT GAGCAGATCG ACGACTTTCT CTTCCGCACC CGCCGCGGCT TCTGCGAGCA CTACGCGGGC AGCTTCGTCT TCCTGATGCG GGCGGCGGGC GTGCCGGCGC GCGTGGTGGT CGGCTACCAG GGCGGCGAGG ACAACGCGGT CAGCGGCGAC CTCATCGTGC GCCAGTCGGA CGCGCACGCC TGGGCCGAGG TGTGGCTGCG CGGGCGCGGC TGGGTGCGGG TGGACCCCAC CGCCGCCGTG GCGCCGCAGC GCGTGGAGCG CGGCCTGGCC GGCGCCGTGC CCGCCAGCGA ATTCCGCTCG CGCCGCGTGC AGGAGCCTGC CTGGCTGCGC AGCGTGCGCT GGGGCCTGGA CGGCCTGATC AGCGGCTGGA ACCGCTGGGT GCTGGGCTAC GACCGCGCCC GGCAGGCCAG GCTGTTCGCC TGGCTGGGGC TGGAGGCGGC CGATCCGCGC GCGGTGCTGT GGGGGGTGTC GGCGCTGTTC CTGCTGGCGG CGCTGCCGCT GCTGTGGCAG CAGCGGCGCC CCAGGCCTGA CCCGGTGCAG GCGCAATGGC AGCGCGTATG CGACCGGCTG GCACGCCACG GCTGCGTGCG CGGCGCGGCG GAAGGGCCGA TGGCCTACGC GGAGCGTGCC GCCGCCCGGT TTCCGCAGGC GGCCGACGCA CTGCGGCGCG TCGCCGCCGG CTATGTCGCG CTGCGCTATG GCCGCGACGA CGGCGACGCG CAGGCGAGAG CGCAGCGGCT GGCGCAATGG CGCAAGGACA TCGCCGCCCT GCGCGTGCCG GGATAG
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Protein sequence | MNAAFGSARA LTHREHGRLI ALLALVLAPL LRSLPLVTCS VFGVLLLWRT GLWVRRAPLP NKWLLGVTGA AVLGITLVLA LRTGGNIGRD LSVAVLGAFL VLKLMESHTV RNGILVTQLC CFLLLSQTLF DQPPWMAATL LASVGLLLHH WMVLLHPQAP ARLSVAGVLL RLVMTGLPCA AVLFLLFPRL DHPLWRLPQG ADVATSGLTD RMAPGSIGQL ILSDDLAFRA DFNGVPPPSG ARYWRGIVLW RFDGQAWTAS SFRQRAEPAS VPNSAGVSDS AGVPDSANAR PGAGRLVDYS ITLEPTRQRW LFALDRGVSI DARDGLRRSI DAEFLSAHPL DERIRYHARS RLPGPGTGDE EALDPLTQQL ALALPPGNPQ ARALAAQWAG LAPAERVASA LKLFRDAPFA YTLEPEPLRG EQIDDFLFRT RRGFCEHYAG SFVFLMRAAG VPARVVVGYQ GGEDNAVSGD LIVRQSDAHA WAEVWLRGRG WVRVDPTAAV APQRVERGLA GAVPASEFRS RRVQEPAWLR SVRWGLDGLI SGWNRWVLGY DRARQARLFA WLGLEAADPR AVLWGVSALF LLAALPLLWQ QRRPRPDPVQ AQWQRVCDRL ARHGCVRGAA EGPMAYAERA AARFPQAADA LRRVAAGYVA LRYGRDDGDA QARAQRLAQW RKDIAALRVP G
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