Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03009 |
Symbol | RSp0113 |
ID | 1222516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 129708 |
End bp | 131270 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637239972 |
Product | hypothetical protein |
Protein accession | NP_521674 |
Protein GI | 17548334 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACTC CAACACAACC CGCTTTTTTC CCGCGTGACA TGCTCGCGGG CACCATCGTT TTTTTCGTCG CCCTGCCGCT GTGCCTGGGC ATTGCCAGTG CATCCGGCGT GGACCCGCTG GCCGGGCTGA TGTCCGGCAT GATCGGCGGG CTGGTGGTGG CGCTGCTCAG CGGTTCGCAA CTGAGCGTGA GCGGCCCGGC GGCCGGGCTG GTCGTCATCG TCGTGGACGG GATCGCCAAG CTGGGCGGCT TCTCTGCGTT CCTGATGGCG GTGCTGCTGT CCGGCGTGCT GCAGTTCGTA TTCGGCATGC TGCGGGCCGG GCGCTTTGCG GCCTATGTGC CCTCGTCCGT CATCAAGGGC ATGCTGGCGG CCATCGGTCT GCTGCTGATC ATCAAGCAGG TGCCGCTGGC GTTCGGCTTC GCGCGCGCAG ACGCTGCGGC GGCAGCCGGC GCCATCGTGA CGCCGTTCGG CTCCGTGTCG GCGGCGGCGA TGGCGGTGAC GGCGCTGTCC GCCGCCGTGC TGATCGGCTG GGAGACCCGC GCGCTGCGCC GGTTCCTGCT GGTGCGGGCG CTGCCGGCGC CGCTGATGGT GGTGGCGCTC GGCATCGGCG TGACGCTGCT GCTCGATGCG GTCGCCCCCG GCGTGGCGCC GCCCGTCGAG CACCGGGTCG GGCTGCCGTC GCTGGCGTCG TTCGGGGCGC TGTTCGATGC GCTGCAGTCG CCGTCGCTCG ACGCGCTGAC CAACCCCGAC GTCTGGCAAC TGGCGCTGGC GCTGGCCATC GTGGCCAGCC TGGAGACGCT GCTGAGCCTG GAGGCCGTCG AGCAGATCGA CCCCAAGAAG CGCCCCGCGC CGGCGGACCG CGAACTGAAG GCCCAGGGCA TCGGCAACAT GATGGCGGGC GTGTTCGGCG CGCTGCCGAT CACCTCCGTG ATCGTGCGCA GCTCGGCCAA CGTGCAGGCC GGCGCGCAGA GCCGCTGGTC GGCCGTGGTG CACGGCGCGC TGCTGCTGGC GAGCGTGTTT ACGCTGACCA GCATCGTCAA CCTGATTCCG CTGGCGTGCC TGGCCACCAT CCTGATCTTC ACCGGCTTCA AGCTGGCCAA ACCGTCGCTG TTCGTGTCCG TGGCGCGGCA GGGCATGGAG CGCTTCGCGC CGTTCATCGT CACGATCGTC GGGGTGCTGC TGACCGACCT GCTGATCGGC ATCCTGATGG GCATCGCGCT CAGCATTGCG CTGGCGATCC GCGCCAACCT GCGGCGCTCG ATCGTCATGG CGCGCCATCA CGACCATTTC CTGCTGTCGT TCCGCAAGGA TGTGTCGTTC ATGGGTAAGG TGCCGCTCAA GCGCTATCTG GCGCAGGTGC CCGACTACAC CACGCTCATC ATCGACGCCA GCCGGGCGGA CTACATCGAC CCCGACGTGC GTGAACTGGT CGAGCGCTTC ATCGAAGACG CGCCGTCGCG CGGCATCCTG ATCGAGCGCC ATCACTTCGA TGCCGCGGCG CCGCAGCCCA CGCGCGCGTC GAAGCTGTTG AAGCTGCGGT TTTCGCGCTG CCCGGCGCGA TAA
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Protein sequence | MQTPTQPAFF PRDMLAGTIV FFVALPLCLG IASASGVDPL AGLMSGMIGG LVVALLSGSQ LSVSGPAAGL VVIVVDGIAK LGGFSAFLMA VLLSGVLQFV FGMLRAGRFA AYVPSSVIKG MLAAIGLLLI IKQVPLAFGF ARADAAAAAG AIVTPFGSVS AAAMAVTALS AAVLIGWETR ALRRFLLVRA LPAPLMVVAL GIGVTLLLDA VAPGVAPPVE HRVGLPSLAS FGALFDALQS PSLDALTNPD VWQLALALAI VASLETLLSL EAVEQIDPKK RPAPADRELK AQGIGNMMAG VFGALPITSV IVRSSANVQA GAQSRWSAVV HGALLLASVF TLTSIVNLIP LACLATILIF TGFKLAKPSL FVSVARQGME RFAPFIVTIV GVLLTDLLIG ILMGIALSIA LAIRANLRRS IVMARHHDHF LLSFRKDVSF MGKVPLKRYL AQVPDYTTLI IDASRADYID PDVRELVERF IEDAPSRGIL IERHHFDAAA PQPTRASKLL KLRFSRCPAR
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