| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02590 |
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| Symbol | RSp1083 |
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| ID | 1223395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1374548 |
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| End bp | 1375528 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637240948 |
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| Product | putative tight adherence TadC related transmembrane protein |
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| Protein accession | NP_522644 |
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| Protein GI | 17549304 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGACT CGCTCCTGAC CCTGAGCCTG ACGGCCGCGA TGGCGGGGCT GCTGGTGTTC
GGCGGCATCG CGGTGCATGC CGTGCTGATG CGCCATCGCA GCGTGCGCAA GCTCGATACG
GCGCTGTCCG ACGTGCGGGC GGCCGGCACG CAGGCCGTGG CGCCGGCGGG CGTGCCGGTG
TCGGCGCCCA AGCCGCGGCC GCAGGCGCAG CAGCTTCAGC AGCAGGTCGC GAAGGTGGGC
CAGCGGTGGA TCGACACGGG CCTCGGGCAC CGCATCGTCA CCGAGGAAGA CCGCAAGCTG
CTGGAGGAGT GCGGCTACTA CGGCGAGCAG GCACGGACGG TCTTCGGCGG CACGCGTATC
CTGCTGCCGC CGTTGCTCTG CGTGGTGGGC GTGCTGTACG CGGCGTCGTT CCGGGAAGCG
CTGCTGTGGG GGTTCGCCGG GTTCGCGCTC GGCTACCTGG CGCCCAAATG GCTGCTGGCA
CGGCGCAAGG AAAGCCGCCG GCGCCGCCTT GACGACGAGC TGCCGGTGAT GGTCGACATG
CTGCGGCTGT TGCAGGGCGT GGGGTTGTCG ATCGATCAGA GCCTGCAGGT CATCGCCAAC
GAGTTCCACG GCATGCTGCC CGTGCTGGCC GACGAGTTCG GTCGGGCCAA CCAGCAGTTC
GCGTCGGGCC GGTCCCGCGA GCAGACCTTG CTGCGCATCG CCCGGCTGTT CGACAACGAA
GATCTGAAGG GGTTGATCAC GCTGCTGACC CAGGTCGACC GGTTCGGCGG CGCCGTGCAG
GAGCCGCTGC GCCAGTTCGG CTTGCGCCTG CAGGAGAACC GCCGCTCCCG GCTCAAGGAG
CGCGTGGGCA AACTGACCGT CAAGATGACC GTCGTGATGG TGCTGACGCT GCTGCCGGCG
CTGCTCATCA TCACGGCCGG GCCCGGCTTC ATGAGCGTGA CGCGCAGTCT TCACCATTCC
CAGCCTAGCG GAGGACGTTG A
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| Protein sequence | MDDSLLTLSL TAAMAGLLVF GGIAVHAVLM RHRSVRKLDT ALSDVRAAGT QAVAPAGVPV
SAPKPRPQAQ QLQQQVAKVG QRWIDTGLGH RIVTEEDRKL LEECGYYGEQ ARTVFGGTRI
LLPPLLCVVG VLYAASFREA LLWGFAGFAL GYLAPKWLLA RRKESRRRRL DDELPVMVDM
LRLLQGVGLS IDQSLQVIAN EFHGMLPVLA DEFGRANQQF ASGRSREQTL LRIARLFDNE
DLKGLITLLT QVDRFGGAVQ EPLRQFGLRL QENRRSRLKE RVGKLTVKMT VVMVLTLLPA
LLIITAGPGF MSVTRSLHHS QPSGGR
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